Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 TSPY12P-201ENST00000421279 868 ntBASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 AP005901.3-202ENST00000581653 237 ntBASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SYNPOQ8N3V7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 AL671883.3-201ENST00000603274 991 ntBASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 AC068587.9-201ENST00000641814 219 ntBASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SYNPOQ8N3V7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 AC008687.5-201ENST00000593746 558 ntBASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 AL591684.3-201ENST00000605187 298 ntBASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 FP475955.4-201ENST00000623131 1990 ntBASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 AL020996.1-203ENST00000536896 2307 ntBASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SYNPOQ8N3V7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 IRX1P1-201ENST00000438849 1838 ntBASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 KRT18P67-201ENST00000432816 1264 ntBASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 FAM197Y8-203ENST00000450145 560 ntBASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 RNA5SP419-201ENST00000515908 135 ntBASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 MIR5100-201ENST00000579544 119 ntBASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.65■□□□□ 0.58
SYNPOQ8N3V7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms