Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 AL591684.3-201ENST00000605187 298 ntBASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 AC007952.6-201ENST00000573168 2673 ntBASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 AC003957.1-201ENST00000625108 2673 ntBASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NPAS3Q8IXF0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 MIR5100-201ENST00000579544 119 ntBASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 AL773604.1-201ENST00000617417 272 ntBASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 AC114341.1-201ENST00000618070 349 ntBASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NPAS3Q8IXF0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.02■□□□□ 0.63
NPAS3Q8IXF0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAS3Q8IXF0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAS3Q8IXF0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPAS3Q8IXF0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
NPAS3Q8IXF0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.02■□□□□ 0.63
NPAS3Q8IXF0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 FAM197Y8-203ENST00000450145 560 ntBASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS3Q8IXF0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 AF228730.7-201ENST00000641842 219 ntBASIC19■□□□□ 0.63
NPAS3Q8IXF0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS3Q8IXF0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19■□□□□ 0.63
NPAS3Q8IXF0 IL9RP2-201ENST00000423948 1312 ntBASIC19■□□□□ 0.63
NPAS3Q8IXF0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS3Q8IXF0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms