Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 AC073648.2-201ENST00000510116 352 ntBASIC19.89■□□□□ 0.77
HERC6Q8IVU3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 FAM215A-202ENST00000632077 792 ntBASIC19.89■□□□□ 0.77
HERC6Q8IVU3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC6Q8IVU3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.88■□□□□ 0.77
HERC6Q8IVU3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HERC6Q8IVU3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 AC005104.2-201ENST00000427818 678 ntBASIC19.87■□□□□ 0.77
HERC6Q8IVU3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 AL355877.3-201ENST00000622820 899 ntBASIC19.87■□□□□ 0.77
HERC6Q8IVU3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC6Q8IVU3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC6Q8IVU3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms