Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 FSCN1P1-201ENST00000568912 1481 ntBASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC50Q8IVM0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 ITM2C-210ENST00000620962 501 ntBASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC50Q8IVM0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 KRT8P45-201ENST00000414328 1447 ntBASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 CD177P1-201ENST00000606252 935 ntBASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 AL162741.1-201ENST00000565563 1558 ntBASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC50Q8IVM0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 AL135905.2-201ENST00000584934 1404 ntBASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC50Q8IVM0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms