Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 AC005082.1-201ENST00000413042 2259 ntBASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 AL591424.1-201ENST00000442569 1213 ntBASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 KRT18P3-201ENST00000451602 1288 ntBASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 AC104390.1-201ENST00000555663 520 ntBASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VPS13BQ7Z7G8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 CNN2P11-201ENST00000429351 262 ntBASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 GUSBP12-201ENST00000513727 720 ntBASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 HEIH-201ENST00000623091 1652 ntBASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AC141586.3-201ENST00000562166 1838 ntBASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 METTL21AP1-201ENST00000438852 635 ntBASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC11.33□□□□□ -0.6
VPS13BQ7Z7G8 AL163051.1-201ENST00000569214 1512 ntBASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 HIST2H3DP1-201ENST00000401004 416 ntBASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 FAM8A3P-201ENST00000427218 844 ntBASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 SCARNA2-201ENST00000458748 420 ntBASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 KRT18P27-201ENST00000427733 1299 ntBASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 MIR3687-2-201ENST00000577708 61 ntBASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 MIR3687-1-201ENST00000614492 61 ntBASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 AC114341.1-201ENST00000618070 349 ntBASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC11.32□□□□□ -0.6
VPS13BQ7Z7G8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 Z98044.1-201ENST00000632503 1764 ntBASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
VPS13BQ7Z7G8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms