Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
WDR88Q6ZMY6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 AP006294.2-201ENST00000641667 209 ntBASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
WDR88Q6ZMY6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 UNC93B2-201ENST00000285383 730 ntBASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 MIR718-201ENST00000390190 70 ntBASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 AL353719.1-201ENST00000566847 864 ntBASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.78■□□□□ 0.28
WDR88Q6ZMY6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 SDHAP2-201ENST00000455183 2001 ntBASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 SLC25A1P2-201ENST00000430693 912 ntBASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 FITM1-202ENST00000559294 800 ntBASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 CR769767.2-201ENST00000622735 460 ntBASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
WDR88Q6ZMY6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms