Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 IGHV3-41-201ENST00000613121 348 ntBASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 AL353692.3-201ENST00000407031 1396 ntBASIC20.46■□□□□ 0.87
SWSAP1Q6NVH7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SWSAP1Q6NVH7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 AL024508.2-201ENST00000607749 1894 ntBASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 DUSP5P1-201ENST00000441325 1139 ntBASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 AC090616.6-201ENST00000582640 721 ntBASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 AC004263.2-201ENST00000617183 678 ntBASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 AC012313.10-201ENST00000623509 926 ntBASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.44■□□□□ 0.86
SWSAP1Q6NVH7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.43■□□□□ 0.86
SWSAP1Q6NVH7 AC126763.1-201ENST00000552015 2118 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms