Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 KRT18P58-201ENST00000527480 1120 ntBASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 AC010240.3-201ENST00000607688 395 ntBASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTC1Q2NKJ3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 HOXB1-202ENST00000577092 1414 ntBASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTC1Q2NKJ3 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 SDHAP1-207ENST00000440850 2000 ntBASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 GPR32P1-201ENST00000601788 811 ntBASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 AL592071.1-201ENST00000611956 408 ntBASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 NSUN5P1-202ENST00000421140 1535 ntBASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 NSUN5P2-203ENST00000457352 1529 ntBASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTC1Q2NKJ3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTC1Q2NKJ3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.64■□□□□ 0.74
CTC1Q2NKJ3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 AP005901.3-202ENST00000581653 237 ntBASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CTC1Q2NKJ3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms