Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.46■□□□□ 0.71
UBE3AQ05086 AC139887.3-201ENST00000568585 713 ntBASIC19.46■□□□□ 0.71
UBE3AQ05086 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3AQ05086 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.46■□□□□ 0.71
UBE3AQ05086 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3AQ05086 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UBE3AQ05086 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
UBE3AQ05086 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBE3AQ05086 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3AQ05086 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3AQ05086 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3AQ05086 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBE3AQ05086 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3AQ05086 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3AQ05086 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.46■□□□□ 0.71
UBE3AQ05086 AC243591.1-201ENST00000452967 1364 ntBASIC19.45■□□□□ 0.7
UBE3AQ05086 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE3AQ05086 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBE3AQ05086 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 RPS2P28-201ENST00000314255 741 ntBASIC19.45■□□□□ 0.7
UBE3AQ05086 MIR149-201ENST00000384879 89 ntBASIC19.45■□□□□ 0.7
UBE3AQ05086 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
UBE3AQ05086 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.45■□□□□ 0.7
UBE3AQ05086 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE3AQ05086 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBE3AQ05086 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBE3AQ05086 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.45■□□□□ 0.7
UBE3AQ05086 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 LINC01521-201ENST00000504184 1943 ntBASIC19.45■□□□□ 0.7
UBE3AQ05086 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.45■□□□□ 0.7
UBE3AQ05086 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
UBE3AQ05086 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
UBE3AQ05086 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE3AQ05086 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.44■□□□□ 0.7
UBE3AQ05086 RCN1P2-201ENST00000398357 915 ntBASIC19.44■□□□□ 0.7
UBE3AQ05086 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE3AQ05086 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.44■□□□□ 0.7
UBE3AQ05086 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.44■□□□□ 0.7
UBE3AQ05086 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.44■□□□□ 0.7
UBE3AQ05086 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
UBE3AQ05086 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UBE3AQ05086 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 PMS2P7-201ENST00000506558 1336 ntBASIC19.44■□□□□ 0.7
UBE3AQ05086 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE3AQ05086 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3AQ05086 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
UBE3AQ05086 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 AC112777.1-201ENST00000540175 1423 ntBASIC19.43■□□□□ 0.7
UBE3AQ05086 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE3AQ05086 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3AQ05086 TP73-AS1-210ENST00000637775 1455 ntBASIC19.43■□□□□ 0.7
UBE3AQ05086 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE3AQ05086 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3AQ05086 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3AQ05086 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBE3AQ05086 FGFR3P6-201ENST00000457012 610 ntBASIC19.43■□□□□ 0.7
UBE3AQ05086 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UBE3AQ05086 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.43■□□□□ 0.7
UBE3AQ05086 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3AQ05086 AC009533.2-201ENST00000543664 586 ntBASIC19.43■□□□□ 0.7
UBE3AQ05086 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3AQ05086 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3AQ05086 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.43■□□□□ 0.7
UBE3AQ05086 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
UBE3AQ05086 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE3AQ05086 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
UBE3AQ05086 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3AQ05086 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms