Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDR2Q01850 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR2Q01850 SDHAP2-201ENST00000455183 2001 ntBASIC19.63■□□□□ 0.73
CDR2Q01850 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDR2Q01850 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR2Q01850 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
CDR2Q01850 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR2Q01850 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDR2Q01850 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR2Q01850 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDR2Q01850 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.63■□□□□ 0.73
CDR2Q01850 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDR2Q01850 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDR2Q01850 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR2Q01850 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.63■□□□□ 0.73
CDR2Q01850 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR2Q01850 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.62■□□□□ 0.73
CDR2Q01850 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR2Q01850 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR2Q01850 GMCL1P1-201ENST00000463439 1581 ntBASIC19.62■□□□□ 0.73
CDR2Q01850 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 AC009102.3-201ENST00000623118 1491 ntBASIC19.62■□□□□ 0.73
CDR2Q01850 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CDR2Q01850 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CDR2Q01850 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 MIR149-201ENST00000384879 89 ntBASIC19.62■□□□□ 0.73
CDR2Q01850 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.62■□□□□ 0.73
CDR2Q01850 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.62■□□□□ 0.73
CDR2Q01850 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR2Q01850 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CDR2Q01850 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.62■□□□□ 0.73
CDR2Q01850 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CDR2Q01850 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 AC112497.1-201ENST00000624824 639 ntBASIC19.62■□□□□ 0.73
CDR2Q01850 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.62■□□□□ 0.73
CDR2Q01850 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDR2Q01850 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDR2Q01850 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDR2Q01850 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.62■□□□□ 0.73
CDR2Q01850 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR2Q01850 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CDR2Q01850 AC099343.3-201ENST00000605834 2503 ntBASIC19.61■□□□□ 0.73
CDR2Q01850 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CDR2Q01850 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.61■□□□□ 0.73
CDR2Q01850 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDR2Q01850 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.61■□□□□ 0.73
CDR2Q01850 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDR2Q01850 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR2Q01850 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.61■□□□□ 0.73
CDR2Q01850 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 AC066615.1-201ENST00000640911 628 ntBASIC19.61■□□□□ 0.73
CDR2Q01850 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR2Q01850 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR2Q01850 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.61■□□□□ 0.73
CDR2Q01850 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.61■□□□□ 0.73
CDR2Q01850 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDR2Q01850 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDR2Q01850 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDR2Q01850 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.6■□□□□ 0.73
CDR2Q01850 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.6■□□□□ 0.73
CDR2Q01850 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms