Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCS1Q01581 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCS1Q01581 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMGCS1Q01581 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HMGCS1Q01581 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HMGCS1Q01581 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 AC036111.1-201ENST00000533973 1582 ntBASIC17.76■□□□□ 0.43
HMGCS1Q01581 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 TSPY7P-201ENST00000431358 1114 ntBASIC17.76■□□□□ 0.43
HMGCS1Q01581 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 MIR3180-5-201ENST00000583743 153 ntBASIC17.76■□□□□ 0.43
HMGCS1Q01581 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 REXO1L9P-201ENST00000604264 2108 ntBASIC17.76■□□□□ 0.43
HMGCS1Q01581 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGCS1Q01581 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGCS1Q01581 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 RBM17P1-201ENST00000453646 1190 ntBASIC17.75■□□□□ 0.43
HMGCS1Q01581 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 AP005242.2-201ENST00000580065 1175 ntBASIC17.75■□□□□ 0.43
HMGCS1Q01581 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.75■□□□□ 0.43
HMGCS1Q01581 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HMGCS1Q01581 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 BCL2-203ENST00000589955 5011 ntBASIC17.74■□□□□ 0.43
HMGCS1Q01581 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 AP000593.1-201ENST00000393668 712 ntBASIC17.74■□□□□ 0.43
HMGCS1Q01581 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HMGCS1Q01581 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HMGCS1Q01581 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms