Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
UBA52P62987 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.89■□□□□ 0.13
UBA52P62987 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 KRT16P1-201ENST00000399124 1418 ntBASIC15.89■□□□□ 0.13
UBA52P62987 NIFKP9-201ENST00000419265 221 ntBASIC15.89■□□□□ 0.13
UBA52P62987 AL390955.1-201ENST00000428694 934 ntBASIC15.89■□□□□ 0.13
UBA52P62987 AC116562.2-201ENST00000507042 360 ntBASIC15.89■□□□□ 0.13
UBA52P62987 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 FITM1-202ENST00000559294 800 ntBASIC15.89■□□□□ 0.13
UBA52P62987 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.89■□□□□ 0.13
UBA52P62987 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.89■□□□□ 0.13
UBA52P62987 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
UBA52P62987 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.89■□□□□ 0.13
UBA52P62987 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.89■□□□□ 0.13
UBA52P62987 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 ESPNP-201ENST00000270691 2015 ntBASIC15.89■□□□□ 0.13
UBA52P62987 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UBA52P62987 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
UBA52P62987 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 AL512353.2-201ENST00000448759 1962 ntBASIC15.88■□□□□ 0.13
UBA52P62987 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.88■□□□□ 0.13
UBA52P62987 AL137013.1-201ENST00000432946 1228 ntBASIC15.88■□□□□ 0.13
UBA52P62987 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.88■□□□□ 0.13
UBA52P62987 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.88■□□□□ 0.13
UBA52P62987 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.88■□□□□ 0.13
UBA52P62987 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.88■□□□□ 0.13
UBA52P62987 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
UBA52P62987 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
UBA52P62987 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
UBA52P62987 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
UBA52P62987 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
UBA52P62987 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.87■□□□□ 0.13
UBA52P62987 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.87■□□□□ 0.13
UBA52P62987 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UBA52P62987 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.87■□□□□ 0.13
UBA52P62987 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 CYP2D8P-201ENST00000433633 1490 ntBASIC15.87■□□□□ 0.13
UBA52P62987 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.87■□□□□ 0.13
UBA52P62987 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
UBA52P62987 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.87■□□□□ 0.13
UBA52P62987 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.87■□□□□ 0.13
UBA52P62987 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.87■□□□□ 0.13
UBA52P62987 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.87■□□□□ 0.13
UBA52P62987 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.87■□□□□ 0.13
UBA52P62987 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
UBA52P62987 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
UBA52P62987 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UBA52P62987 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms