Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
SRP54P61011 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SRP54P61011 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.15■□□□□ 0.5
SRP54P61011 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.15■□□□□ 0.5
SRP54P61011 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.15■□□□□ 0.5
SRP54P61011 DUSP5P1-201ENST00000441325 1139 ntBASIC18.15■□□□□ 0.5
SRP54P61011 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.15■□□□□ 0.5
SRP54P61011 AP003733.1-201ENST00000491725 852 ntBASIC18.15■□□□□ 0.5
SRP54P61011 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
SRP54P61011 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.15■□□□□ 0.5
SRP54P61011 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.15■□□□□ 0.5
SRP54P61011 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SRP54P61011 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SRP54P61011 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
SRP54P61011 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.5
SRP54P61011 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
SRP54P61011 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.14■□□□□ 0.49
SRP54P61011 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SRP54P61011 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.14■□□□□ 0.49
SRP54P61011 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 CHCHD2P8-201ENST00000429873 447 ntBASIC18.14■□□□□ 0.49
SRP54P61011 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.14■□□□□ 0.49
SRP54P61011 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.14■□□□□ 0.49
SRP54P61011 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.14■□□□□ 0.49
SRP54P61011 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.14■□□□□ 0.49
SRP54P61011 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.14■□□□□ 0.49
SRP54P61011 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SRP54P61011 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SRP54P61011 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SRP54P61011 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SRP54P61011 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SRP54P61011 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SRP54P61011 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 Z83836.1-201ENST00000624605 1642 ntBASIC18.13■□□□□ 0.49
SRP54P61011 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.13■□□□□ 0.49
SRP54P61011 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.13■□□□□ 0.49
SRP54P61011 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 AP002383.4-201ENST00000442518 975 ntBASIC18.13■□□□□ 0.49
SRP54P61011 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 MIR3180-1-201ENST00000580374 94 ntBASIC18.13■□□□□ 0.49
SRP54P61011 MIR3180-3-201ENST00000584616 94 ntBASIC18.13■□□□□ 0.49
SRP54P61011 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SRP54P61011 AC005332.3-201ENST00000589904 676 ntBASIC18.13■□□□□ 0.49
SRP54P61011 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.13■□□□□ 0.49
SRP54P61011 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SRP54P61011 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SRP54P61011 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.13■□□□□ 0.49
SRP54P61011 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SRP54P61011 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRP54P61011 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.12■□□□□ 0.49
SRP54P61011 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.12■□□□□ 0.49
SRP54P61011 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.12■□□□□ 0.49
SRP54P61011 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SRP54P61011 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.12■□□□□ 0.49
SRP54P61011 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.12■□□□□ 0.49
SRP54P61011 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.12■□□□□ 0.49
SRP54P61011 AP002414.4-201ENST00000589764 1148 ntBASIC18.12■□□□□ 0.49
SRP54P61011 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRP54P61011 AC024563.2-201ENST00000603282 481 ntBASIC18.12■□□□□ 0.49
SRP54P61011 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms