Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN2P57739 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLDN2P57739 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.15■□□□□ 0.5
CLDN2P57739 AC104819.1-201ENST00000504587 486 ntBASIC18.15■□□□□ 0.5
CLDN2P57739 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.15■□□□□ 0.5
CLDN2P57739 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.15■□□□□ 0.5
CLDN2P57739 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN2P57739 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.15■□□□□ 0.5
CLDN2P57739 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLDN2P57739 IFNL4P1-201ENST00000607083 540 ntBASIC18.15■□□□□ 0.5
CLDN2P57739 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN2P57739 AC004263.2-201ENST00000617183 678 ntBASIC18.15■□□□□ 0.5
CLDN2P57739 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN2P57739 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.15■□□□□ 0.5
CLDN2P57739 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN2P57739 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLDN2P57739 AC233702.3-201ENST00000578656 1387 ntBASIC18.15■□□□□ 0.5
CLDN2P57739 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLDN2P57739 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 MIR149-201ENST00000384879 89 ntBASIC18.14■□□□□ 0.49
CLDN2P57739 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.14■□□□□ 0.49
CLDN2P57739 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLDN2P57739 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN2P57739 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.14■□□□□ 0.49
CLDN2P57739 GUSBP12-201ENST00000513727 720 ntBASIC18.14■□□□□ 0.49
CLDN2P57739 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.14■□□□□ 0.49
CLDN2P57739 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.14■□□□□ 0.49
CLDN2P57739 AC138894.3-201ENST00000603787 634 ntBASIC18.14■□□□□ 0.49
CLDN2P57739 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLDN2P57739 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.14■□□□□ 0.49
CLDN2P57739 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLDN2P57739 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLDN2P57739 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 MYLKP1-201ENST00000509077 1580 ntBASIC18.13■□□□□ 0.49
CLDN2P57739 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
CLDN2P57739 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN2P57739 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN2P57739 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN2P57739 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN2P57739 TSPY19P-201ENST00000418461 509 ntBASIC18.13■□□□□ 0.49
CLDN2P57739 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
CLDN2P57739 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
CLDN2P57739 AC246785.2-201ENST00000432512 513 ntBASIC18.13■□□□□ 0.49
CLDN2P57739 TSPY18P-201ENST00000441642 509 ntBASIC18.13■□□□□ 0.49
CLDN2P57739 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 RN7SL606P-201ENST00000472779 293 ntBASIC18.13■□□□□ 0.49
CLDN2P57739 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.13■□□□□ 0.49
CLDN2P57739 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.13■□□□□ 0.49
CLDN2P57739 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLDN2P57739 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.13■□□□□ 0.49
CLDN2P57739 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN2P57739 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN2P57739 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.13■□□□□ 0.49
CLDN2P57739 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 AC009102.3-201ENST00000623118 1491 ntBASIC18.13■□□□□ 0.49
CLDN2P57739 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLDN2P57739 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 AC091607.1-201ENST00000490318 1060 ntBASIC18.12■□□□□ 0.49
CLDN2P57739 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 AC091304.2-201ENST00000564639 760 ntBASIC18.12■□□□□ 0.49
CLDN2P57739 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms