Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.92■□□□□ 0.46
AP1S2P56377 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.92■□□□□ 0.46
AP1S2P56377 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
AP1S2P56377 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.92■□□□□ 0.46
AP1S2P56377 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.92■□□□□ 0.46
AP1S2P56377 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
AP1S2P56377 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.92■□□□□ 0.46
AP1S2P56377 SLC25A3P1-201ENST00000443844 931 ntBASIC17.92■□□□□ 0.46
AP1S2P56377 SEC1P-202ENST00000473944 940 ntBASIC17.92■□□□□ 0.46
AP1S2P56377 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP1S2P56377 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.92■□□□□ 0.46
AP1S2P56377 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.92■□□□□ 0.46
AP1S2P56377 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.92■□□□□ 0.46
AP1S2P56377 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
AP1S2P56377 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP1S2P56377 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.92■□□□□ 0.46
AP1S2P56377 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.92■□□□□ 0.46
AP1S2P56377 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP1S2P56377 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP1S2P56377 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
AP1S2P56377 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP1S2P56377 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 AC093677.2-201ENST00000600169 1863 ntBASIC17.91■□□□□ 0.46
AP1S2P56377 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.91■□□□□ 0.46
AP1S2P56377 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.91■□□□□ 0.46
AP1S2P56377 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.91■□□□□ 0.46
AP1S2P56377 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.91■□□□□ 0.46
AP1S2P56377 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 AC097493.4-201ENST00000641197 219 ntBASIC17.91■□□□□ 0.46
AP1S2P56377 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP1S2P56377 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.91■□□□□ 0.46
AP1S2P56377 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.91■□□□□ 0.46
AP1S2P56377 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
AP1S2P56377 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP1S2P56377 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 AC135776.1-201ENST00000319817 2481 ntBASIC17.9■□□□□ 0.46
AP1S2P56377 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.9■□□□□ 0.46
AP1S2P56377 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.9■□□□□ 0.46
AP1S2P56377 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.9■□□□□ 0.46
AP1S2P56377 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
AP1S2P56377 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.9■□□□□ 0.46
AP1S2P56377 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.9■□□□□ 0.46
AP1S2P56377 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.9■□□□□ 0.46
AP1S2P56377 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 AC012306.2-201ENST00000609350 630 ntBASIC17.9■□□□□ 0.46
AP1S2P56377 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 AL138966.2-201ENST00000621997 464 ntBASIC17.9■□□□□ 0.46
AP1S2P56377 AC141257.4-201ENST00000634557 245 ntBASIC17.9■□□□□ 0.46
AP1S2P56377 AC136944.6-201ENST00000634818 245 ntBASIC17.9■□□□□ 0.46
AP1S2P56377 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 AC092865.7-201ENST00000641832 219 ntBASIC17.9■□□□□ 0.46
AP1S2P56377 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
AP1S2P56377 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.9■□□□□ 0.46
AP1S2P56377 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
AP1S2P56377 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
AP1S2P56377 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
AP1S2P56377 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms