Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.78■□□□□ 0.92
USP11P51784 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.78■□□□□ 0.92
USP11P51784 AC116407.4-201ENST00000623319 1061 ntBASIC20.78■□□□□ 0.92
USP11P51784 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
USP11P51784 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP11P51784 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.78■□□□□ 0.92
USP11P51784 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.78■□□□□ 0.92
USP11P51784 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.77■□□□□ 0.92
USP11P51784 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.77■□□□□ 0.92
USP11P51784 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.77■□□□□ 0.92
USP11P51784 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
USP11P51784 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.77■□□□□ 0.92
USP11P51784 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 PCED1CP-201ENST00000419887 785 ntBASIC20.77■□□□□ 0.92
USP11P51784 AL645929.1-201ENST00000420084 975 ntBASIC20.77■□□□□ 0.92
USP11P51784 KRT18P48-201ENST00000434763 852 ntBASIC20.77■□□□□ 0.92
USP11P51784 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
USP11P51784 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.77■□□□□ 0.92
USP11P51784 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.77■□□□□ 0.92
USP11P51784 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
USP11P51784 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.77■□□□□ 0.92
USP11P51784 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 LINC01126-201ENST00000623515 1646 ntBASIC20.77■□□□□ 0.92
USP11P51784 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
USP11P51784 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.77■□□□□ 0.92
USP11P51784 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP11P51784 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP11P51784 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.77■□□□□ 0.91
USP11P51784 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.77■□□□□ 0.91
USP11P51784 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP11P51784 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP11P51784 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.76■□□□□ 0.91
USP11P51784 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.76■□□□□ 0.91
USP11P51784 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.76■□□□□ 0.91
USP11P51784 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.76■□□□□ 0.91
USP11P51784 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.76■□□□□ 0.91
USP11P51784 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.76■□□□□ 0.91
USP11P51784 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.76■□□□□ 0.91
USP11P51784 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.76■□□□□ 0.91
USP11P51784 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.76■□□□□ 0.91
USP11P51784 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.76■□□□□ 0.91
USP11P51784 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.76■□□□□ 0.91
USP11P51784 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP11P51784 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.76■□□□□ 0.91
USP11P51784 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP11P51784 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.75■□□□□ 0.91
USP11P51784 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
USP11P51784 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.75■□□□□ 0.91
USP11P51784 AC113404.2-201ENST00000507884 177 ntBASIC20.75■□□□□ 0.91
USP11P51784 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.75■□□□□ 0.91
USP11P51784 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.75■□□□□ 0.91
USP11P51784 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.75■□□□□ 0.91
USP11P51784 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
USP11P51784 AC091076.1-201ENST00000610741 619 ntBASIC20.75■□□□□ 0.91
USP11P51784 AL358472.4-201ENST00000633140 710 ntBASIC20.75■□□□□ 0.91
USP11P51784 AP000550.4-202ENST00000639755 178 ntBASIC20.75■□□□□ 0.91
USP11P51784 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 AC090164.3-201ENST00000610780 2143 ntBASIC20.75■□□□□ 0.91
USP11P51784 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP11P51784 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP11P51784 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP11P51784 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP11P51784 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.74■□□□□ 0.91
USP11P51784 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms