Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.41■□□□□ 0.22
LHX2P50458 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.41■□□□□ 0.22
LHX2P50458 KRT18P56-201ENST00000507275 550 ntBASIC16.41■□□□□ 0.22
LHX2P50458 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.41■□□□□ 0.22
LHX2P50458 AC126763.1-201ENST00000552015 2118 ntBASIC16.41■□□□□ 0.22
LHX2P50458 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.41■□□□□ 0.22
LHX2P50458 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.41■□□□□ 0.22
LHX2P50458 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
LHX2P50458 MIR3180-1-201ENST00000580374 94 ntBASIC16.41■□□□□ 0.22
LHX2P50458 MIR3180-3-201ENST00000584616 94 ntBASIC16.41■□□□□ 0.22
LHX2P50458 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.41■□□□□ 0.22
LHX2P50458 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LHX2P50458 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LHX2P50458 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.41■□□□□ 0.22
LHX2P50458 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.4■□□□□ 0.22
LHX2P50458 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.4■□□□□ 0.22
LHX2P50458 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LHX2P50458 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.4■□□□□ 0.22
LHX2P50458 AP002414.4-201ENST00000589764 1148 ntBASIC16.4■□□□□ 0.22
LHX2P50458 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.4■□□□□ 0.22
LHX2P50458 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.4■□□□□ 0.22
LHX2P50458 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.4■□□□□ 0.22
LHX2P50458 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LHX2P50458 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.4■□□□□ 0.22
LHX2P50458 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.4■□□□□ 0.22
LHX2P50458 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LHX2P50458 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.4■□□□□ 0.22
LHX2P50458 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LHX2P50458 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.39■□□□□ 0.22
LHX2P50458 AL353692.3-201ENST00000407031 1396 ntBASIC16.39■□□□□ 0.21
LHX2P50458 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
LHX2P50458 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
LHX2P50458 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.39■□□□□ 0.21
LHX2P50458 AC113404.2-201ENST00000507884 177 ntBASIC16.39■□□□□ 0.21
LHX2P50458 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LHX2P50458 AC092329.2-201ENST00000598402 547 ntBASIC16.39■□□□□ 0.21
LHX2P50458 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.39■□□□□ 0.21
LHX2P50458 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.39■□□□□ 0.21
LHX2P50458 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.39■□□□□ 0.21
LHX2P50458 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LHX2P50458 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
LHX2P50458 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LHX2P50458 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.39■□□□□ 0.21
LHX2P50458 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LHX2P50458 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX2P50458 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX2P50458 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
LHX2P50458 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX2P50458 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
LHX2P50458 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX2P50458 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.38■□□□□ 0.21
LHX2P50458 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LHX2P50458 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LHX2P50458 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LHX2P50458 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.38■□□□□ 0.21
LHX2P50458 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LHX2P50458 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.38■□□□□ 0.21
LHX2P50458 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.38■□□□□ 0.21
LHX2P50458 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.38■□□□□ 0.21
LHX2P50458 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.38■□□□□ 0.21
LHX2P50458 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LHX2P50458 AC090616.6-201ENST00000582640 721 ntBASIC16.38■□□□□ 0.21
LHX2P50458 AC004263.2-201ENST00000617183 678 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms