Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.71■□□□□ 0.91
CENPFP49454 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.71■□□□□ 0.91
CENPFP49454 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.71■□□□□ 0.91
CENPFP49454 MIR4469-201ENST00000583919 79 ntBASIC20.71■□□□□ 0.91
CENPFP49454 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 TCF3P1-201ENST00000423021 1937 ntBASIC20.71■□□□□ 0.91
CENPFP49454 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CENPFP49454 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CENPFP49454 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CENPFP49454 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 AC244107.1-201ENST00000442033 332 ntBASIC20.7■□□□□ 0.9
CENPFP49454 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.7■□□□□ 0.9
CENPFP49454 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 KRT89P-201ENST00000620027 1478 ntBASIC20.7■□□□□ 0.9
CENPFP49454 AL357033.4-201ENST00000617703 1807 ntBASIC20.7■□□□□ 0.9
CENPFP49454 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.7■□□□□ 0.9
CENPFP49454 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.7■□□□□ 0.9
CENPFP49454 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.7■□□□□ 0.9
CENPFP49454 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.7■□□□□ 0.9
CENPFP49454 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.7■□□□□ 0.9
CENPFP49454 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CENPFP49454 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CENPFP49454 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CENPFP49454 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.69■□□□□ 0.9
CENPFP49454 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.69■□□□□ 0.9
CENPFP49454 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CENPFP49454 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
CENPFP49454 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CENPFP49454 AL645939.2-201ENST00000427340 991 ntBASIC20.69■□□□□ 0.9
CENPFP49454 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.69■□□□□ 0.9
CENPFP49454 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.69■□□□□ 0.9
CENPFP49454 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.69■□□□□ 0.9
CENPFP49454 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.69■□□□□ 0.9
CENPFP49454 AL499627.1-201ENST00000569373 2188 ntBASIC20.69■□□□□ 0.9
CENPFP49454 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CENPFP49454 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CENPFP49454 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CENPFP49454 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CENPFP49454 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CENPFP49454 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.68■□□□□ 0.9
CENPFP49454 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.68■□□□□ 0.9
CENPFP49454 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.68■□□□□ 0.9
CENPFP49454 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.68■□□□□ 0.9
CENPFP49454 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.68■□□□□ 0.9
CENPFP49454 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.68■□□□□ 0.9
CENPFP49454 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CENPFP49454 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.68■□□□□ 0.9
CENPFP49454 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.68■□□□□ 0.9
CENPFP49454 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CENPFP49454 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CENPFP49454 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
CENPFP49454 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.68■□□□□ 0.9
CENPFP49454 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CENPFP49454 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.67■□□□□ 0.9
CENPFP49454 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms