Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDX1P47902 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.03■□□□□ -0
CDX1P47902 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDX1P47902 B3GAT3P1-201ENST00000471720 806 ntBASIC15.03■□□□□ -0
CDX1P47902 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.03■□□□□ -0
CDX1P47902 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.03■□□□□ -0
CDX1P47902 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.03■□□□□ -0
CDX1P47902 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.03■□□□□ -0
CDX1P47902 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.03■□□□□ -0
CDX1P47902 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.03■□□□□ -0
CDX1P47902 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 AL162727.3-201ENST00000635661 2787 ntBASIC15.03■□□□□ -0
CDX1P47902 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CDX1P47902 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.03■□□□□ -0
CDX1P47902 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.03■□□□□ -0
CDX1P47902 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CDX1P47902 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.03■□□□□ -0
CDX1P47902 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CDX1P47902 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDX1P47902 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CDX1P47902 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDX1P47902 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.02■□□□□ -0
CDX1P47902 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CDX1P47902 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CDX1P47902 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CDX1P47902 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.02■□□□□ -0
CDX1P47902 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CDX1P47902 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.02■□□□□ -0
CDX1P47902 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.02■□□□□ -0
CDX1P47902 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.02■□□□□ -0
CDX1P47902 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.02■□□□□ -0
CDX1P47902 FITM1-202ENST00000559294 800 ntBASIC15.02■□□□□ -0
CDX1P47902 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.02■□□□□ -0
CDX1P47902 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.02■□□□□ -0
CDX1P47902 AL160286.2-201ENST00000567150 934 ntBASIC15.02■□□□□ -0
CDX1P47902 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.02■□□□□ -0
CDX1P47902 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.02■□□□□ -0
CDX1P47902 AC130371.2-201ENST00000619443 611 ntBASIC15.02■□□□□ -0
CDX1P47902 AC133561.5-201ENST00000635547 218 ntBASIC15.02■□□□□ -0
CDX1P47902 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDX1P47902 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDX1P47902 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDX1P47902 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CDX1P47902 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDX1P47902 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CDX1P47902 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.01□□□□□ -0.01
CDX1P47902 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDX1P47902 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CDX1P47902 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.01□□□□□ -0.01
CDX1P47902 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.01□□□□□ -0.01
CDX1P47902 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CDX1P47902 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CDX1P47902 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 MESTP1-201ENST00000404287 994 ntBASIC15.01□□□□□ -0.01
CDX1P47902 MIR1238-201ENST00000408483 83 ntBASIC15.01□□□□□ -0.01
CDX1P47902 AC004951.3-201ENST00000418645 1148 ntBASIC15.01□□□□□ -0.01
CDX1P47902 ECEL1P3-201ENST00000427961 737 ntBASIC15.01□□□□□ -0.01
CDX1P47902 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.01□□□□□ -0.01
CDX1P47902 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.01□□□□□ -0.01
CDX1P47902 AC011506.1-201ENST00000474329 610 ntBASIC15.01□□□□□ -0.01
CDX1P47902 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CDX1P47902 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDX1P47902 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms