Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.63■■□□□ 1.21
PDE6BP35913 AC098831.1-202ENST00000438821 336 ntBASIC22.63■■□□□ 1.21
PDE6BP35913 MTCL1P1-201ENST00000446207 792 ntBASIC22.63■■□□□ 1.21
PDE6BP35913 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.63■■□□□ 1.21
PDE6BP35913 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.63■■□□□ 1.21
PDE6BP35913 OR7E14P-202ENST00000530490 1290 ntBASIC22.63■■□□□ 1.21
PDE6BP35913 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.63■■□□□ 1.21
PDE6BP35913 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.63■■□□□ 1.21
PDE6BP35913 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.63■■□□□ 1.21
PDE6BP35913 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
PDE6BP35913 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PDE6BP35913 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PDE6BP35913 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.62■■□□□ 1.21
PDE6BP35913 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDE6BP35913 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.62■■□□□ 1.21
PDE6BP35913 AL157384.1-201ENST00000445995 2473 ntBASIC22.62■■□□□ 1.21
PDE6BP35913 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.62■■□□□ 1.21
PDE6BP35913 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.62■■□□□ 1.21
PDE6BP35913 AC092910.1-201ENST00000482027 1129 ntBASIC22.62■■□□□ 1.21
PDE6BP35913 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.62■■□□□ 1.21
PDE6BP35913 Z83851.2-201ENST00000609564 659 ntBASIC22.62■■□□□ 1.21
PDE6BP35913 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.62■■□□□ 1.21
PDE6BP35913 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PDE6BP35913 AC125634.1-201ENST00000438758 1403 ntBASIC22.62■■□□□ 1.21
PDE6BP35913 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
PDE6BP35913 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.62■■□□□ 1.21
PDE6BP35913 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDE6BP35913 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.62■■□□□ 1.21
PDE6BP35913 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PDE6BP35913 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.61■■□□□ 1.21
PDE6BP35913 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 AL356309.3-201ENST00000624132 1934 ntBASIC22.61■■□□□ 1.21
PDE6BP35913 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PDE6BP35913 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.61■■□□□ 1.21
PDE6BP35913 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PDE6BP35913 RPSAP43-201ENST00000402237 625 ntBASIC22.61■■□□□ 1.21
PDE6BP35913 RAB17-203ENST00000409576 466 ntTSL 3 BASIC22.61■■□□□ 1.21
PDE6BP35913 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.61■■□□□ 1.21
PDE6BP35913 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.61■■□□□ 1.21
PDE6BP35913 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.61■■□□□ 1.21
PDE6BP35913 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.61■■□□□ 1.21
PDE6BP35913 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
PDE6BP35913 PNMT-203ENST00000581428 677 ntTSL 2 BASIC22.61■■□□□ 1.21
PDE6BP35913 AC010327.4-202ENST00000591484 748 ntBASIC22.61■■□□□ 1.21
PDE6BP35913 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.61■■□□□ 1.21
PDE6BP35913 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PDE6BP35913 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.61■■□□□ 1.21
PDE6BP35913 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PDE6BP35913 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.61■■□□□ 1.21
PDE6BP35913 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.61■■□□□ 1.21
PDE6BP35913 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDE6BP35913 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.6■■□□□ 1.21
PDE6BP35913 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PDE6BP35913 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.6■■□□□ 1.21
PDE6BP35913 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.6■■□□□ 1.21
PDE6BP35913 GPX1P2-201ENST00000429271 606 ntBASIC22.6■■□□□ 1.21
PDE6BP35913 KRT18P3-201ENST00000451602 1288 ntBASIC22.6■■□□□ 1.21
PDE6BP35913 AL139424.1-201ENST00000607572 797 ntBASIC22.6■■□□□ 1.21
PDE6BP35913 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PDE6BP35913 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDE6BP35913 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.59■■□□□ 1.21
PDE6BP35913 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.59■■□□□ 1.21
PDE6BP35913 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
PDE6BP35913 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PDE6BP35913 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PDE6BP35913 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDE6BP35913 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
PDE6BP35913 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.59■■□□□ 1.21
PDE6BP35913 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.59■■□□□ 1.21
PDE6BP35913 RNA5SP415-201ENST00000517246 115 ntBASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms