Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RORAP35398 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RORAP35398 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RORAP35398 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.48■□□□□ 0.39
RORAP35398 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.48■□□□□ 0.39
RORAP35398 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.48■□□□□ 0.39
RORAP35398 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.48■□□□□ 0.39
RORAP35398 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.48■□□□□ 0.39
RORAP35398 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
RORAP35398 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.48■□□□□ 0.39
RORAP35398 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.48■□□□□ 0.39
RORAP35398 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
RORAP35398 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 BX323043.1-201ENST00000641006 1765 ntBASIC17.48■□□□□ 0.39
RORAP35398 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RORAP35398 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RORAP35398 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.47■□□□□ 0.39
RORAP35398 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.47■□□□□ 0.39
RORAP35398 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
RORAP35398 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 AL450487.1-201ENST00000426799 995 ntBASIC17.47■□□□□ 0.39
RORAP35398 TSPY22P-201ENST00000427496 604 ntBASIC17.47■□□□□ 0.39
RORAP35398 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.47■□□□□ 0.39
RORAP35398 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.47■□□□□ 0.39
RORAP35398 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.47■□□□□ 0.39
RORAP35398 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.47■□□□□ 0.39
RORAP35398 AC092329.2-201ENST00000598402 547 ntBASIC17.47■□□□□ 0.39
RORAP35398 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.47■□□□□ 0.39
RORAP35398 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 LETM1P2-201ENST00000597330 2178 ntBASIC17.47■□□□□ 0.39
RORAP35398 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.47■□□□□ 0.39
RORAP35398 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RORAP35398 AC026471.1-201ENST00000564629 3026 ntBASIC17.47■□□□□ 0.39
RORAP35398 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 AC018445.3-201ENST00000624177 1945 ntBASIC17.47■□□□□ 0.39
RORAP35398 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RORAP35398 KRT8P50-201ENST00000562022 1438 ntBASIC17.47■□□□□ 0.39
RORAP35398 AC087289.5-201ENST00000586076 3175 ntBASIC17.46■□□□□ 0.39
RORAP35398 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.46■□□□□ 0.39
RORAP35398 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.46■□□□□ 0.39
RORAP35398 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RORAP35398 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RORAP35398 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RORAP35398 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.46■□□□□ 0.39
RORAP35398 CHCHD2P8-201ENST00000429873 447 ntBASIC17.46■□□□□ 0.39
RORAP35398 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RORAP35398 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.46■□□□□ 0.39
RORAP35398 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.46■□□□□ 0.39
RORAP35398 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.46■□□□□ 0.39
RORAP35398 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.46■□□□□ 0.39
RORAP35398 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.46■□□□□ 0.39
RORAP35398 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RORAP35398 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.46■□□□□ 0.39
RORAP35398 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
RORAP35398 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms