Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DMBP28068 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
HLA-DMBP28068 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.06□□□□□ -0.16
HLA-DMBP28068 LTB4R2-202ENST00000528054 3092 ntBASIC14.06□□□□□ -0.16
HLA-DMBP28068 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DMBP28068 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DMBP28068 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.06□□□□□ -0.16
HLA-DMBP28068 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 AL162741.1-201ENST00000565563 1558 ntBASIC14.05□□□□□ -0.16
HLA-DMBP28068 AC008556.1-201ENST00000610908 2040 ntBASIC14.05□□□□□ -0.16
HLA-DMBP28068 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 AC008622.2-201ENST00000617006 1229 ntBASIC14.05□□□□□ -0.16
HLA-DMBP28068 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 KRT8P45-201ENST00000414328 1447 ntBASIC14.05□□□□□ -0.16
HLA-DMBP28068 AC112777.1-201ENST00000540175 1423 ntBASIC14.05□□□□□ -0.16
HLA-DMBP28068 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 ESPNP-201ENST00000270691 2015 ntBASIC14.05□□□□□ -0.16
HLA-DMBP28068 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.05□□□□□ -0.16
HLA-DMBP28068 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HLA-DMBP28068 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.04□□□□□ -0.16
HLA-DMBP28068 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 MESTP1-201ENST00000404287 994 ntBASIC14.04□□□□□ -0.16
HLA-DMBP28068 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 AC026271.3-201ENST00000571884 352 ntBASIC14.04□□□□□ -0.16
HLA-DMBP28068 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HLA-DMBP28068 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.04□□□□□ -0.16
HLA-DMBP28068 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms