Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.65■□□□□ 0.26
APEX1P27695 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APEX1P27695 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.65■□□□□ 0.26
APEX1P27695 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
APEX1P27695 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
APEX1P27695 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APEX1P27695 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.65■□□□□ 0.26
APEX1P27695 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APEX1P27695 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APEX1P27695 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APEX1P27695 LINC00896-202ENST00000609602 2128 ntBASIC16.64■□□□□ 0.25
APEX1P27695 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APEX1P27695 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APEX1P27695 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 TSPY21P-201ENST00000433481 731 ntBASIC16.64■□□□□ 0.25
APEX1P27695 TSPY23P-201ENST00000440136 739 ntBASIC16.64■□□□□ 0.25
APEX1P27695 B3GAT3P1-201ENST00000471720 806 ntBASIC16.64■□□□□ 0.25
APEX1P27695 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.64■□□□□ 0.25
APEX1P27695 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.64■□□□□ 0.25
APEX1P27695 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.64■□□□□ 0.25
APEX1P27695 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.64■□□□□ 0.25
APEX1P27695 AC026471.5-201ENST00000615068 467 ntBASIC16.64■□□□□ 0.25
APEX1P27695 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 AC083906.6-201ENST00000641366 219 ntBASIC16.64■□□□□ 0.25
APEX1P27695 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 FSCN1P1-201ENST00000568912 1481 ntBASIC16.64■□□□□ 0.25
APEX1P27695 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.64■□□□□ 0.25
APEX1P27695 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.64■□□□□ 0.25
APEX1P27695 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.64■□□□□ 0.25
APEX1P27695 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APEX1P27695 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APEX1P27695 FEM1AP3-201ENST00000403722 1741 ntBASIC16.64■□□□□ 0.25
APEX1P27695 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APEX1P27695 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
APEX1P27695 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.63■□□□□ 0.25
APEX1P27695 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.63■□□□□ 0.25
APEX1P27695 PCDHA12-202ENST00000613593 2588 ntBASIC16.63■□□□□ 0.25
APEX1P27695 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.63■□□□□ 0.25
APEX1P27695 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
APEX1P27695 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
APEX1P27695 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
APEX1P27695 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
APEX1P27695 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
APEX1P27695 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.63■□□□□ 0.25
APEX1P27695 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.63■□□□□ 0.25
APEX1P27695 AC008040.2-201ENST00000461049 708 ntBASIC16.63■□□□□ 0.25
APEX1P27695 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.63■□□□□ 0.25
APEX1P27695 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.63■□□□□ 0.25
APEX1P27695 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
APEX1P27695 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.63■□□□□ 0.25
APEX1P27695 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.63■□□□□ 0.25
APEX1P27695 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
APEX1P27695 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.63■□□□□ 0.25
APEX1P27695 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
APEX1P27695 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.63■□□□□ 0.25
APEX1P27695 AC126763.1-201ENST00000552015 2118 ntBASIC16.63■□□□□ 0.25
APEX1P27695 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APEX1P27695 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APEX1P27695 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APEX1P27695 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.62■□□□□ 0.25
APEX1P27695 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
APEX1P27695 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APEX1P27695 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APEX1P27695 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APEX1P27695 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APEX1P27695 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms