Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.46■□□□□ 0.87
SMPD1P17405 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.46■□□□□ 0.87
SMPD1P17405 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SMPD1P17405 AC008687.5-201ENST00000593746 558 ntBASIC20.46■□□□□ 0.87
SMPD1P17405 GPALPP1-207ENST00000611650 899 ntBASIC20.46■□□□□ 0.87
SMPD1P17405 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMPD1P17405 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.46■□□□□ 0.87
SMPD1P17405 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.46■□□□□ 0.87
SMPD1P17405 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SMPD1P17405 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.45■□□□□ 0.87
SMPD1P17405 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.45■□□□□ 0.86
SMPD1P17405 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD1P17405 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD1P17405 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SMPD1P17405 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD1P17405 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.45■□□□□ 0.86
SMPD1P17405 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
SMPD1P17405 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD1P17405 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.45■□□□□ 0.86
SMPD1P17405 AL031284.1-201ENST00000419297 478 ntBASIC20.45■□□□□ 0.86
SMPD1P17405 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SMPD1P17405 KRT18P67-201ENST00000432816 1264 ntBASIC20.45■□□□□ 0.86
SMPD1P17405 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.45■□□□□ 0.86
SMPD1P17405 AC008608.2-201ENST00000606089 416 ntBASIC20.45■□□□□ 0.86
SMPD1P17405 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.45■□□□□ 0.86
SMPD1P17405 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SMPD1P17405 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMPD1P17405 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SMPD1P17405 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.45■□□□□ 0.86
SMPD1P17405 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.44■□□□□ 0.86
SMPD1P17405 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.44■□□□□ 0.86
SMPD1P17405 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.44■□□□□ 0.86
SMPD1P17405 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 TP73-AS1-210ENST00000637775 1455 ntBASIC20.44■□□□□ 0.86
SMPD1P17405 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.44■□□□□ 0.86
SMPD1P17405 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SMPD1P17405 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.44■□□□□ 0.86
SMPD1P17405 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.44■□□□□ 0.86
SMPD1P17405 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.44■□□□□ 0.86
SMPD1P17405 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SMPD1P17405 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.44■□□□□ 0.86
SMPD1P17405 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SMPD1P17405 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMPD1P17405 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.43■□□□□ 0.86
SMPD1P17405 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.43■□□□□ 0.86
SMPD1P17405 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 AC005332.7-201ENST00000614046 2005 ntBASIC20.43■□□□□ 0.86
SMPD1P17405 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.43■□□□□ 0.86
SMPD1P17405 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.43■□□□□ 0.86
SMPD1P17405 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SMPD1P17405 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SMPD1P17405 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 SLC25A1P1-201ENST00000528351 927 ntBASIC20.43■□□□□ 0.86
SMPD1P17405 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.43■□□□□ 0.86
SMPD1P17405 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.43■□□□□ 0.86
SMPD1P17405 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.43■□□□□ 0.86
SMPD1P17405 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 AL499627.1-201ENST00000569373 2188 ntBASIC20.43■□□□□ 0.86
SMPD1P17405 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.43■□□□□ 0.86
SMPD1P17405 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 AC112777.1-201ENST00000540175 1423 ntBASIC20.43■□□□□ 0.86
SMPD1P17405 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.43■□□□□ 0.86
SMPD1P17405 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMPD1P17405 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.42■□□□□ 0.86
SMPD1P17405 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SMPD1P17405 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.42■□□□□ 0.86
SMPD1P17405 MIR574-201ENST00000385209 96 ntBASIC20.42■□□□□ 0.86
SMPD1P17405 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms