Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
BMP3P12645 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.21■□□□□ 0.99
BMP3P12645 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.21■□□□□ 0.99
BMP3P12645 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.2■□□□□ 0.99
BMP3P12645 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.2■□□□□ 0.98
BMP3P12645 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.2■□□□□ 0.98
BMP3P12645 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BMP3P12645 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.2■□□□□ 0.98
BMP3P12645 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.2■□□□□ 0.98
BMP3P12645 AC074051.2-201ENST00000565115 352 ntBASIC21.2■□□□□ 0.98
BMP3P12645 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.2■□□□□ 0.98
BMP3P12645 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BMP3P12645 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.2■□□□□ 0.98
BMP3P12645 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BMP3P12645 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BMP3P12645 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.2■□□□□ 0.98
BMP3P12645 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.2■□□□□ 0.98
BMP3P12645 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.2■□□□□ 0.98
BMP3P12645 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BMP3P12645 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.19■□□□□ 0.98
BMP3P12645 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
BMP3P12645 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.19■□□□□ 0.98
BMP3P12645 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.19■□□□□ 0.98
BMP3P12645 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.19■□□□□ 0.98
BMP3P12645 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.19■□□□□ 0.98
BMP3P12645 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.19■□□□□ 0.98
BMP3P12645 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.19■□□□□ 0.98
BMP3P12645 Z69720.1-201ENST00000601483 472 ntBASIC21.19■□□□□ 0.98
BMP3P12645 LINC00167-201ENST00000530583 1419 ntBASIC21.19■□□□□ 0.98
BMP3P12645 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.19■□□□□ 0.98
BMP3P12645 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BMP3P12645 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
BMP3P12645 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.18■□□□□ 0.98
BMP3P12645 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.18■□□□□ 0.98
BMP3P12645 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
BMP3P12645 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.18■□□□□ 0.98
BMP3P12645 TSPY19P-201ENST00000418461 509 ntBASIC21.18■□□□□ 0.98
BMP3P12645 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
BMP3P12645 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.18■□□□□ 0.98
BMP3P12645 TSPY18P-201ENST00000441642 509 ntBASIC21.18■□□□□ 0.98
BMP3P12645 UNC93B7-201ENST00000509439 705 ntBASIC21.18■□□□□ 0.98
BMP3P12645 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.18■□□□□ 0.98
BMP3P12645 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
BMP3P12645 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.18■□□□□ 0.98
BMP3P12645 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
BMP3P12645 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
BMP3P12645 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.18■□□□□ 0.98
BMP3P12645 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
BMP3P12645 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.18■□□□□ 0.98
BMP3P12645 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
BMP3P12645 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BMP3P12645 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BMP3P12645 KRT17P6-201ENST00000453795 1220 ntBASIC21.17■□□□□ 0.98
BMP3P12645 FOSL1P1-201ENST00000511041 816 ntBASIC21.17■□□□□ 0.98
BMP3P12645 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.17■□□□□ 0.98
BMP3P12645 AC111152.3-201ENST00000569699 673 ntBASIC21.17■□□□□ 0.98
BMP3P12645 RN7SL510P-201ENST00000581311 263 ntBASIC21.17■□□□□ 0.98
BMP3P12645 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.17■□□□□ 0.98
BMP3P12645 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.17■□□□□ 0.98
BMP3P12645 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.17■□□□□ 0.98
BMP3P12645 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
BMP3P12645 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.17■□□□□ 0.98
BMP3P12645 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
BMP3P12645 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
BMP3P12645 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
BMP3P12645 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 AC005082.1-201ENST00000413042 2259 ntBASIC21.16■□□□□ 0.98
BMP3P12645 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
BMP3P12645 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.16■□□□□ 0.98
BMP3P12645 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.16■□□□□ 0.98
BMP3P12645 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
BMP3P12645 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms