Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT3P12035 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KRT3P12035 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 BCL2-203ENST00000589955 5011 ntBASIC19.4■□□□□ 0.7
KRT3P12035 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 AL354751.1-201ENST00000412768 1863 ntBASIC19.4■□□□□ 0.7
KRT3P12035 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 AC099343.3-201ENST00000605834 2503 ntBASIC19.4■□□□□ 0.7
KRT3P12035 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
KRT3P12035 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
KRT3P12035 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
KRT3P12035 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT3P12035 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.4■□□□□ 0.7
KRT3P12035 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT3P12035 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT3P12035 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
KRT3P12035 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KRT3P12035 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.4■□□□□ 0.7
KRT3P12035 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
KRT3P12035 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
KRT3P12035 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KRT3P12035 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.4■□□□□ 0.7
KRT3P12035 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
KRT3P12035 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT3P12035 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT3P12035 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KRT3P12035 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.39■□□□□ 0.7
KRT3P12035 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT3P12035 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.39■□□□□ 0.69
KRT3P12035 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.39■□□□□ 0.69
KRT3P12035 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRT3P12035 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT3P12035 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 AC007613.1-201ENST00000572811 2597 ntBASIC19.39■□□□□ 0.69
KRT3P12035 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KRT3P12035 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT3P12035 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT3P12035 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT3P12035 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.39■□□□□ 0.69
KRT3P12035 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT3P12035 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
KRT3P12035 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KRT3P12035 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.39■□□□□ 0.69
KRT3P12035 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT3P12035 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 AC135776.1-201ENST00000319817 2481 ntBASIC19.38■□□□□ 0.69
KRT3P12035 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT3P12035 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT3P12035 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT3P12035 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 AC009947.2-201ENST00000444014 672 ntBASIC19.38■□□□□ 0.69
KRT3P12035 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT3P12035 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.38■□□□□ 0.69
KRT3P12035 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.38■□□□□ 0.69
KRT3P12035 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.38■□□□□ 0.69
KRT3P12035 AC104390.1-201ENST00000555663 520 ntBASIC19.38■□□□□ 0.69
KRT3P12035 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT3P12035 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.38■□□□□ 0.69
KRT3P12035 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
KRT3P12035 AC073912.3-201ENST00000624414 853 ntBASIC19.38■□□□□ 0.69
KRT3P12035 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.38■□□□□ 0.69
KRT3P12035 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KRT3P12035 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms