Protein–RNA interactions for Protein: P11532

DMD, Dystrophin, humanhuman

Predictions only

Length 3,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DMDP11532 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.12■□□□□ 0.49
DMDP11532 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
DMDP11532 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.11■□□□□ 0.49
DMDP11532 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.11■□□□□ 0.49
DMDP11532 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.11■□□□□ 0.49
DMDP11532 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 SNHG9-202ENST00000564014 471 ntBASIC18.11■□□□□ 0.49
DMDP11532 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.11■□□□□ 0.49
DMDP11532 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
DMDP11532 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.11■□□□□ 0.49
DMDP11532 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.11■□□□□ 0.49
DMDP11532 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.11■□□□□ 0.49
DMDP11532 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.11■□□□□ 0.49
DMDP11532 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.11■□□□□ 0.49
DMDP11532 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.11■□□□□ 0.49
DMDP11532 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.11■□□□□ 0.49
DMDP11532 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DMDP11532 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.1■□□□□ 0.49
DMDP11532 AC005034.1-201ENST00000426657 489 ntBASIC18.1■□□□□ 0.49
DMDP11532 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.1■□□□□ 0.49
DMDP11532 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.1■□□□□ 0.49
DMDP11532 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.1■□□□□ 0.49
DMDP11532 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.1■□□□□ 0.49
DMDP11532 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.1■□□□□ 0.49
DMDP11532 PDPK2P-202ENST00000562415 1191 ntBASIC18.1■□□□□ 0.49
DMDP11532 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.1■□□□□ 0.49
DMDP11532 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
DMDP11532 AC125634.1-201ENST00000438758 1403 ntBASIC18.1■□□□□ 0.49
DMDP11532 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.1■□□□□ 0.49
DMDP11532 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.1■□□□□ 0.49
DMDP11532 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.1■□□□□ 0.49
DMDP11532 AL513190.1-201ENST00000621254 727 ntBASIC18.1■□□□□ 0.49
DMDP11532 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.1■□□□□ 0.49
DMDP11532 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.1■□□□□ 0.49
DMDP11532 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.1■□□□□ 0.49
DMDP11532 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DMDP11532 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.09■□□□□ 0.49
DMDP11532 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.09■□□□□ 0.49
DMDP11532 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DMDP11532 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.09■□□□□ 0.49
DMDP11532 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DMDP11532 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.09■□□□□ 0.49
DMDP11532 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
DMDP11532 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 Z92544.3-201ENST00000624747 417 ntBASIC18.09■□□□□ 0.49
DMDP11532 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.09■□□□□ 0.49
DMDP11532 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.09■□□□□ 0.49
DMDP11532 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 AL390955.2-201ENST00000603032 514 ntBASIC18.09■□□□□ 0.49
DMDP11532 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DMDP11532 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DMDP11532 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.09■□□□□ 0.49
DMDP11532 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 KRT89P-201ENST00000620027 1478 ntBASIC18.09■□□□□ 0.49
DMDP11532 AL357033.4-201ENST00000617703 1807 ntBASIC18.09■□□□□ 0.49
DMDP11532 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DMDP11532 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.09■□□□□ 0.49
DMDP11532 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DMDP11532 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
DMDP11532 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.09■□□□□ 0.49
DMDP11532 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DMDP11532 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.08■□□□□ 0.49
DMDP11532 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DMDP11532 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DMDP11532 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DMDP11532 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DMDP11532 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DMDP11532 Z82202.1-201ENST00000623446 1880 ntBASIC18.08■□□□□ 0.49
DMDP11532 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.08■□□□□ 0.49
DMDP11532 AL078644.1-201ENST00000609881 752 ntBASIC18.08■□□□□ 0.49
DMDP11532 AC008735.5-201ENST00000623544 497 ntBASIC18.08■□□□□ 0.49
DMDP11532 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
DMDP11532 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
DMDP11532 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DMDP11532 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms