Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CHRNA1P02708 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHRNA1P02708 AC068472.1-201ENST00000474589 881 ntBASIC20■□□□□ 0.79
CHRNA1P02708 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20■□□□□ 0.79
CHRNA1P02708 RNA5SP419-201ENST00000515908 135 ntBASIC20■□□□□ 0.79
CHRNA1P02708 AL591684.3-201ENST00000605187 298 ntBASIC20■□□□□ 0.79
CHRNA1P02708 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CHRNA1P02708 ANKRD20A8P-203ENST00000641373 517 ntBASIC20■□□□□ 0.79
CHRNA1P02708 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20■□□□□ 0.79
CHRNA1P02708 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
CHRNA1P02708 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20■□□□□ 0.79
CHRNA1P02708 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHRNA1P02708 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHRNA1P02708 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA1P02708 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA1P02708 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CHRNA1P02708 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.99■□□□□ 0.79
CHRNA1P02708 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CHRNA1P02708 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA1P02708 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA1P02708 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA1P02708 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA1P02708 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.99■□□□□ 0.79
CHRNA1P02708 AC096582.2-201ENST00000510860 516 ntBASIC19.99■□□□□ 0.79
CHRNA1P02708 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CHRNA1P02708 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA1P02708 AC005336.2-201ENST00000593183 939 ntBASIC19.99■□□□□ 0.79
CHRNA1P02708 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CHRNA1P02708 AL499627.1-201ENST00000569373 2188 ntBASIC19.99■□□□□ 0.79
CHRNA1P02708 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA1P02708 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CHRNA1P02708 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHRNA1P02708 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.99■□□□□ 0.79
CHRNA1P02708 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.99■□□□□ 0.79
CHRNA1P02708 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA1P02708 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA1P02708 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA1P02708 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CHRNA1P02708 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.98■□□□□ 0.79
CHRNA1P02708 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.98■□□□□ 0.79
CHRNA1P02708 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.98■□□□□ 0.79
CHRNA1P02708 AC114341.1-201ENST00000618070 349 ntBASIC19.98■□□□□ 0.79
CHRNA1P02708 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CHRNA1P02708 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.98■□□□□ 0.79
CHRNA1P02708 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.97■□□□□ 0.79
CHRNA1P02708 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA1P02708 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA1P02708 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.97■□□□□ 0.79
CHRNA1P02708 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CHRNA1P02708 AC132008.2-207ENST00000454517 770 ntBASIC19.97■□□□□ 0.79
CHRNA1P02708 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA1P02708 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.97■□□□□ 0.79
CHRNA1P02708 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA1P02708 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.97■□□□□ 0.79
CHRNA1P02708 AC008687.5-201ENST00000593746 558 ntBASIC19.97■□□□□ 0.79
CHRNA1P02708 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 BX640515.1-201ENST00000617215 977 ntBASIC19.97■□□□□ 0.79
CHRNA1P02708 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.97■□□□□ 0.79
CHRNA1P02708 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CHRNA1P02708 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHRNA1P02708 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CHRNA1P02708 AC112777.1-201ENST00000540175 1423 ntBASIC19.96■□□□□ 0.79
CHRNA1P02708 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 RCN1P2-201ENST00000398357 915 ntBASIC19.96■□□□□ 0.79
CHRNA1P02708 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 FAM197Y8-203ENST00000450145 560 ntBASIC19.96■□□□□ 0.79
CHRNA1P02708 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.96■□□□□ 0.79
CHRNA1P02708 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.96■□□□□ 0.79
CHRNA1P02708 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.96■□□□□ 0.79
CHRNA1P02708 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.96■□□□□ 0.79
CHRNA1P02708 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.96■□□□□ 0.79
CHRNA1P02708 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHRNA1P02708 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms