Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.45■□□□□ 0.54
PDGFBP01127 AC254562.1-201ENST00000417586 456 ntBASIC18.45■□□□□ 0.54
PDGFBP01127 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.45■□□□□ 0.54
PDGFBP01127 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.45■□□□□ 0.54
PDGFBP01127 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.45■□□□□ 0.54
PDGFBP01127 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFBP01127 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.45■□□□□ 0.54
PDGFBP01127 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.45■□□□□ 0.54
PDGFBP01127 AP002472.1-201ENST00000577490 586 ntBASIC18.45■□□□□ 0.54
PDGFBP01127 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.45■□□□□ 0.54
PDGFBP01127 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.45■□□□□ 0.54
PDGFBP01127 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFBP01127 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.45■□□□□ 0.54
PDGFBP01127 Z98044.1-201ENST00000632503 1764 ntBASIC18.45■□□□□ 0.54
PDGFBP01127 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFBP01127 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 LINC00565-201ENST00000562710 2331 ntBASIC18.44■□□□□ 0.54
PDGFBP01127 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.44■□□□□ 0.54
PDGFBP01127 AC125634.1-201ENST00000438758 1403 ntBASIC18.44■□□□□ 0.54
PDGFBP01127 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFBP01127 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.44■□□□□ 0.54
PDGFBP01127 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDGFBP01127 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFBP01127 CNN2P11-201ENST00000429351 262 ntBASIC18.44■□□□□ 0.54
PDGFBP01127 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFBP01127 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFBP01127 SPCS2P1-201ENST00000561636 679 ntBASIC18.44■□□□□ 0.54
PDGFBP01127 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PDGFBP01127 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PDGFBP01127 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.44■□□□□ 0.54
PDGFBP01127 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFBP01127 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDGFBP01127 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PDGFBP01127 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.43■□□□□ 0.54
PDGFBP01127 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.43■□□□□ 0.54
PDGFBP01127 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.43■□□□□ 0.54
PDGFBP01127 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
PDGFBP01127 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.43■□□□□ 0.54
PDGFBP01127 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.43■□□□□ 0.54
PDGFBP01127 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PDGFBP01127 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PDGFBP01127 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
PDGFBP01127 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.43■□□□□ 0.54
PDGFBP01127 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.43■□□□□ 0.54
PDGFBP01127 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.43■□□□□ 0.54
PDGFBP01127 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.43■□□□□ 0.54
PDGFBP01127 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PDGFBP01127 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PDGFBP01127 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDGFBP01127 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PDGFBP01127 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.42■□□□□ 0.54
PDGFBP01127 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.42■□□□□ 0.54
PDGFBP01127 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.42■□□□□ 0.54
PDGFBP01127 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFBP01127 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDGFBP01127 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFBP01127 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
PDGFBP01127 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.42■□□□□ 0.54
PDGFBP01127 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFBP01127 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDGFBP01127 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDGFBP01127 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.42■□□□□ 0.54
PDGFBP01127 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.42■□□□□ 0.54
PDGFBP01127 HLA-J-202ENST00000469281 1241 ntBASIC18.42■□□□□ 0.54
PDGFBP01127 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.42■□□□□ 0.54
PDGFBP01127 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.42■□□□□ 0.54
PDGFBP01127 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDGFBP01127 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDGFBP01127 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.42■□□□□ 0.54
PDGFBP01127 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.42■□□□□ 0.54
PDGFBP01127 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDGFBP01127 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.42■□□□□ 0.54
PDGFBP01127 AC092865.6-201ENST00000642101 219 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms