Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SFT2D2O95562 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.28■□□□□ 0.04
SFT2D2O95562 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SFT2D2O95562 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.28■□□□□ 0.04
SFT2D2O95562 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.28■□□□□ 0.04
SFT2D2O95562 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.28■□□□□ 0.04
SFT2D2O95562 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.28■□□□□ 0.04
SFT2D2O95562 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.28■□□□□ 0.04
SFT2D2O95562 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SFT2D2O95562 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SFT2D2O95562 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SFT2D2O95562 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.28■□□□□ 0.04
SFT2D2O95562 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SFT2D2O95562 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SFT2D2O95562 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SFT2D2O95562 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SFT2D2O95562 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SFT2D2O95562 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SFT2D2O95562 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SFT2D2O95562 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.27■□□□□ 0.04
SFT2D2O95562 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SFT2D2O95562 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.27■□□□□ 0.04
SFT2D2O95562 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.27■□□□□ 0.04
SFT2D2O95562 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SFT2D2O95562 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.27■□□□□ 0.04
SFT2D2O95562 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.27■□□□□ 0.04
SFT2D2O95562 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SFT2D2O95562 AL121832.2-201ENST00000610979 668 ntBASIC15.27■□□□□ 0.04
SFT2D2O95562 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.27■□□□□ 0.04
SFT2D2O95562 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.27■□□□□ 0.04
SFT2D2O95562 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SFT2D2O95562 AC022211.2-201ENST00000585075 2527 ntBASIC15.27■□□□□ 0.03
SFT2D2O95562 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.27■□□□□ 0.03
SFT2D2O95562 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SFT2D2O95562 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.27■□□□□ 0.03
SFT2D2O95562 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SFT2D2O95562 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFT2D2O95562 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.27■□□□□ 0.03
SFT2D2O95562 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFT2D2O95562 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SFT2D2O95562 NKILA-202ENST00000614771 2598 ntBASIC15.27■□□□□ 0.03
SFT2D2O95562 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SFT2D2O95562 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.26■□□□□ 0.03
SFT2D2O95562 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SFT2D2O95562 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.26■□□□□ 0.03
SFT2D2O95562 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
SFT2D2O95562 POU5F1P3-201ENST00000428824 1078 ntBASIC15.26■□□□□ 0.03
SFT2D2O95562 KRT18P5-201ENST00000436075 1291 ntBASIC15.26■□□□□ 0.03
SFT2D2O95562 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SFT2D2O95562 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.26■□□□□ 0.03
SFT2D2O95562 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.26■□□□□ 0.03
SFT2D2O95562 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.26■□□□□ 0.03
SFT2D2O95562 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
SFT2D2O95562 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SFT2D2O95562 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SFT2D2O95562 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms