Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 FLJ13224-201ENST00000313737 1514 ntBASIC15.71■□□□□ 0.11
SSNA1O43805 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSNA1O43805 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SSNA1O43805 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SSNA1O43805 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.71■□□□□ 0.11
SSNA1O43805 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.71■□□□□ 0.11
SSNA1O43805 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSNA1O43805 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSNA1O43805 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSNA1O43805 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
SSNA1O43805 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSNA1O43805 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SSNA1O43805 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSNA1O43805 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSNA1O43805 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSNA1O43805 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SSNA1O43805 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 TFP1-202ENST00000475455 1573 ntBASIC15.7■□□□□ 0.1
SSNA1O43805 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 AL162727.3-201ENST00000635661 2787 ntBASIC15.7■□□□□ 0.1
SSNA1O43805 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.7■□□□□ 0.1
SSNA1O43805 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SSNA1O43805 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.7■□□□□ 0.1
SSNA1O43805 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.7■□□□□ 0.1
SSNA1O43805 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.7■□□□□ 0.1
SSNA1O43805 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.7■□□□□ 0.1
SSNA1O43805 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SSNA1O43805 AL136162.1-201ENST00000607711 1078 ntBASIC15.7■□□□□ 0.1
SSNA1O43805 AC105020.6-201ENST00000621523 1217 ntBASIC15.7■□□□□ 0.1
SSNA1O43805 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
SSNA1O43805 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SSNA1O43805 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.7■□□□□ 0.1
SSNA1O43805 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
SSNA1O43805 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSNA1O43805 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SSNA1O43805 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.69■□□□□ 0.1
SSNA1O43805 AL391005.1-201ENST00000623953 2435 ntBASIC15.69■□□□□ 0.1
SSNA1O43805 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SSNA1O43805 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 AL121761.2-201ENST00000598007 1648 ntBASIC15.69■□□□□ 0.1
SSNA1O43805 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.69■□□□□ 0.1
SSNA1O43805 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.69■□□□□ 0.1
SSNA1O43805 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.69■□□□□ 0.1
SSNA1O43805 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.69■□□□□ 0.1
SSNA1O43805 AL591742.1-201ENST00000604433 565 ntBASIC15.69■□□□□ 0.1
SSNA1O43805 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SSNA1O43805 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.69■□□□□ 0.1
SSNA1O43805 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SSNA1O43805 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.69■□□□□ 0.1
SSNA1O43805 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
SSNA1O43805 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 AC126755.1-201ENST00000525846 6405 ntBASIC15.69■□□□□ 0.1
SSNA1O43805 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSNA1O43805 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 AC135279.3-201ENST00000610945 1311 ntBASIC15.68■□□□□ 0.1
SSNA1O43805 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSNA1O43805 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.68■□□□□ 0.1
SSNA1O43805 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSNA1O43805 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SSNA1O43805 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms