Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 RNPS1P1-201ENST00000507437 918 ntBASIC24.63■■□□□ 1.53
PIK3C2AO00443 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.63■■□□□ 1.53
PIK3C2AO00443 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC24.63■■□□□ 1.53
PIK3C2AO00443 AC139530.3-201ENST00000620344 690 ntBASIC24.63■■□□□ 1.53
PIK3C2AO00443 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.63■■□□□ 1.53
PIK3C2AO00443 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PIK3C2AO00443 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 AC125634.1-201ENST00000438758 1403 ntBASIC24.63■■□□□ 1.53
PIK3C2AO00443 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.63■■□□□ 1.53
PIK3C2AO00443 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PIK3C2AO00443 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.62■■□□□ 1.53
PIK3C2AO00443 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 POLD2P1-201ENST00000511220 997 ntBASIC24.62■■□□□ 1.53
PIK3C2AO00443 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 AC008687.5-201ENST00000593746 558 ntBASIC24.62■■□□□ 1.53
PIK3C2AO00443 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
PIK3C2AO00443 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PIK3C2AO00443 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PIK3C2AO00443 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PIK3C2AO00443 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PIK3C2AO00443 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PIK3C2AO00443 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC24.61■■□□□ 1.53
PIK3C2AO00443 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.61■■□□□ 1.53
PIK3C2AO00443 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.61■■□□□ 1.53
PIK3C2AO00443 KRT18P13-201ENST00000400056 1290 ntBASIC24.61■■□□□ 1.53
PIK3C2AO00443 RBSN-204ENST00000449050 903 ntTSL 2 BASIC24.61■■□□□ 1.53
PIK3C2AO00443 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC24.61■■□□□ 1.53
PIK3C2AO00443 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.61■■□□□ 1.53
PIK3C2AO00443 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PIK3C2AO00443 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
PIK3C2AO00443 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PIK3C2AO00443 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PIK3C2AO00443 CSF3-203ENST00000394148 622 ntTSL 3 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 AC132008.2-207ENST00000454517 770 ntBASIC24.6■■□□□ 1.53
PIK3C2AO00443 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC24.6■■□□□ 1.53
PIK3C2AO00443 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PIK3C2AO00443 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 RPP21-221ENST00000428040 594 ntTSL 2 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 MTCL1P1-201ENST00000446207 792 ntBASIC24.59■■□□□ 1.53
PIK3C2AO00443 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 AC012640.2-201ENST00000561606 901 ntBASIC24.59■■□□□ 1.53
PIK3C2AO00443 CYGB-205ENST00000590175 830 ntTSL 3 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 FAM215A-202ENST00000632077 792 ntBASIC24.59■■□□□ 1.53
PIK3C2AO00443 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PIK3C2AO00443 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 PGAM5P1-201ENST00000518923 814 ntBASIC24.59■■□□□ 1.53
PIK3C2AO00443 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 MTDHP3-201ENST00000594186 672 ntBASIC24.59■■□□□ 1.53
PIK3C2AO00443 PRKN-208ENST00000610470 531 ntTSL 2 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 PRKN-209ENST00000612485 225 ntTSL 5 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC24.59■■□□□ 1.53
PIK3C2AO00443 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms