Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 KRT8P11-201ENST00000409686 1436 ntBASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 AC091874.3-201ENST00000512672 1195 ntBASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 AC087623.3-201ENST00000607047 1098 ntBASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRDV1A0A1B0GX56 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRDV1A0A1B0GX56 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 AL121761.2-201ENST00000598007 1648 ntBASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 LINC00602-201ENST00000629776 2065 ntBASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.2■□□□□ 0.18
TRDV1A0A1B0GX56 RCC2P3-201ENST00000418112 1537 ntBASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 AC011676.5-201ENST00000624864 2660 ntBASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 MIPEPP3-201ENST00000412105 444 ntBASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 PRSS44-201ENST00000515154 1146 ntBASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRDV1A0A1B0GX56 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms