Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PCDHA9Q9Y5H5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHA9Q9Y5H5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA9Q9Y5H5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.97■■□□□ 1.43
PCDHA9Q9Y5H5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
PCDHA9Q9Y5H5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA9Q9Y5H5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA9Q9Y5H5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA9Q9Y5H5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA9Q9Y5H5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
PCDHA9Q9Y5H5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA9Q9Y5H5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDHA9Q9Y5H5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHA9Q9Y5H5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PCDHA9Q9Y5H5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.94■■□□□ 1.42
PCDHA9Q9Y5H5 LINC01971-201ENST00000617888 1048 ntBASIC23.94■■□□□ 1.42
PCDHA9Q9Y5H5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA9Q9Y5H5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHA9Q9Y5H5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA9Q9Y5H5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHA9Q9Y5H5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.93■■□□□ 1.42
PCDHA9Q9Y5H5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA9Q9Y5H5 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHA9Q9Y5H5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA9Q9Y5H5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHA9Q9Y5H5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.92■■□□□ 1.42
PCDHA9Q9Y5H5 AC110285.7-201ENST00000624417 1536 ntBASIC23.92■■□□□ 1.42
PCDHA9Q9Y5H5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PCDHA9Q9Y5H5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.92■■□□□ 1.42
PCDHA9Q9Y5H5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA9Q9Y5H5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA9Q9Y5H5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHA9Q9Y5H5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHA9Q9Y5H5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.91■■□□□ 1.42
PCDHA9Q9Y5H5 AC018358.1-201ENST00000631079 1402 ntBASIC23.91■■□□□ 1.42
PCDHA9Q9Y5H5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
PCDHA9Q9Y5H5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA9Q9Y5H5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHA9Q9Y5H5 ZNRF2P2-203ENST00000454624 420 ntBASIC23.9■■□□□ 1.42
PCDHA9Q9Y5H5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHA9Q9Y5H5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA9Q9Y5H5 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHA9Q9Y5H5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA9Q9Y5H5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHA9Q9Y5H5 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PCDHA9Q9Y5H5 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHA9Q9Y5H5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA9Q9Y5H5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHA9Q9Y5H5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHA9Q9Y5H5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA9Q9Y5H5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHA9Q9Y5H5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA9Q9Y5H5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA9Q9Y5H5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHA9Q9Y5H5 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHA9Q9Y5H5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA9Q9Y5H5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHA9Q9Y5H5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHA9Q9Y5H5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.86■■□□□ 1.41
PCDHA9Q9Y5H5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PCDHA9Q9Y5H5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PCDHA9Q9Y5H5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PCDHA9Q9Y5H5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHA9Q9Y5H5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHA9Q9Y5H5 ABHD17AP4-201ENST00000411545 909 ntBASIC23.86■■□□□ 1.41
PCDHA9Q9Y5H5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHA9Q9Y5H5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA9Q9Y5H5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
PCDHA9Q9Y5H5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHA9Q9Y5H5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA9Q9Y5H5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA9Q9Y5H5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PCDHA9Q9Y5H5 AC145676.1-201ENST00000514988 2004 ntBASIC23.84■■□□□ 1.41
PCDHA9Q9Y5H5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHA9Q9Y5H5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L13-201ENST00000554103 1267 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L15-201ENST00000611059 1267 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L11-201ENST00000611504 1267 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L12-201ENST00000614593 1267 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L23-201ENST00000615195 1269 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L24-201ENST00000617576 1269 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L22-201ENST00000618238 1269 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L20-201ENST00000619712 1269 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L14-201ENST00000621227 1267 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L21-201ENST00000622058 1269 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L10-201ENST00000622460 1267 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DUX4L25-201ENST00000624915 1269 ntBASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHA9Q9Y5H5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA9Q9Y5H5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHA9Q9Y5H5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA9Q9Y5H5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHA9Q9Y5H5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA9Q9Y5H5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHA9Q9Y5H5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHA9Q9Y5H5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHA9Q9Y5H5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHA9Q9Y5H5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHA9Q9Y5H5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms