Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhac2Q91Y09 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pcdhac2Q91Y09 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhac2Q91Y09 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhac2Q91Y09 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.16■■□□□ 1.62
Pcdhac2Q91Y09 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.16■■□□□ 1.62
Pcdhac2Q91Y09 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhac2Q91Y09 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhac2Q91Y09 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhac2Q91Y09 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.15■■□□□ 1.62
Pcdhac2Q91Y09 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhac2Q91Y09 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.14■■□□□ 1.62
Pcdhac2Q91Y09 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhac2Q91Y09 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhac2Q91Y09 Gm5921-201ENSMUST00000075898 882 ntBASIC25.14■■□□□ 1.62
Pcdhac2Q91Y09 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
Pcdhac2Q91Y09 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Pcdhac2Q91Y09 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhac2Q91Y09 Gm5812-201ENSMUST00000061073 957 ntBASIC25.13■■□□□ 1.61
Pcdhac2Q91Y09 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhac2Q91Y09 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
Pcdhac2Q91Y09 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Pcdhac2Q91Y09 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhac2Q91Y09 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.12■■□□□ 1.61
Pcdhac2Q91Y09 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhac2Q91Y09 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.11■■□□□ 1.61
Pcdhac2Q91Y09 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhac2Q91Y09 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhac2Q91Y09 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhac2Q91Y09 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhac2Q91Y09 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhac2Q91Y09 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.61
Pcdhac2Q91Y09 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhac2Q91Y09 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.07■■□□□ 1.6
Pcdhac2Q91Y09 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhac2Q91Y09 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhac2Q91Y09 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhac2Q91Y09 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Pcdhac2Q91Y09 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhac2Q91Y09 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhac2Q91Y09 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.05■■□□□ 1.6
Pcdhac2Q91Y09 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhac2Q91Y09 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Pcdhac2Q91Y09 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.04■■□□□ 1.6
Pcdhac2Q91Y09 Gm44428-201ENSMUST00000204474 874 ntBASIC25.04■■□□□ 1.6
Pcdhac2Q91Y09 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.04■■□□□ 1.6
Pcdhac2Q91Y09 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
Pcdhac2Q91Y09 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Pcdhac2Q91Y09 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.03■■□□□ 1.6
Pcdhac2Q91Y09 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhac2Q91Y09 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhac2Q91Y09 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhac2Q91Y09 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhac2Q91Y09 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhac2Q91Y09 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhac2Q91Y09 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhac2Q91Y09 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhac2Q91Y09 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhac2Q91Y09 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Pcdhac2Q91Y09 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhac2Q91Y09 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25■■□□□ 1.59
Pcdhac2Q91Y09 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.99■■□□□ 1.59
Pcdhac2Q91Y09 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.99■■□□□ 1.59
Pcdhac2Q91Y09 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.99■■□□□ 1.59
Pcdhac2Q91Y09 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhac2Q91Y09 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhac2Q91Y09 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Pcdhac2Q91Y09 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhac2Q91Y09 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.98■■□□□ 1.59
Pcdhac2Q91Y09 Gm22567-201ENSMUST00000175542 342 ntBASIC24.98■■□□□ 1.59
Pcdhac2Q91Y09 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhac2Q91Y09 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhac2Q91Y09 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhac2Q91Y09 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Gm13238-201ENSMUST00000117655 780 ntBASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Pcdhac2Q91Y09 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhac2Q91Y09 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
Pcdhac2Q91Y09 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.95■■□□□ 1.58
Pcdhac2Q91Y09 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhac2Q91Y09 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Pcdhac2Q91Y09 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Pcdhac2Q91Y09 Gm15546-201ENSMUST00000122095 826 ntBASIC24.92■■□□□ 1.58
Pcdhac2Q91Y09 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhac2Q91Y09 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhac2Q91Y09 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Pcdhac2Q91Y09 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.91■■□□□ 1.58
Pcdhac2Q91Y09 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhac2Q91Y09 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.9■■□□□ 1.58
Pcdhac2Q91Y09 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhac2Q91Y09 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.9■■□□□ 1.58
Pcdhac2Q91Y09 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhac2Q91Y09 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Pcdhac2Q91Y09 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms