Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Trex1Q91XB0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trex1Q91XB0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Trex1Q91XB0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trex1Q91XB0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.54■■□□□ 1.84
Trex1Q91XB0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trex1Q91XB0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trex1Q91XB0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trex1Q91XB0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trex1Q91XB0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trex1Q91XB0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trex1Q91XB0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
Trex1Q91XB0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trex1Q91XB0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.51■■□□□ 1.83
Trex1Q91XB0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.51■■□□□ 1.83
Trex1Q91XB0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Trex1Q91XB0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.51■■□□□ 1.83
Trex1Q91XB0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Trex1Q91XB0 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.5■■□□□ 1.83
Trex1Q91XB0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trex1Q91XB0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trex1Q91XB0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trex1Q91XB0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trex1Q91XB0 Gm44428-201ENSMUST00000204474 874 ntBASIC26.47■■□□□ 1.83
Trex1Q91XB0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Trex1Q91XB0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.46■■□□□ 1.83
Trex1Q91XB0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trex1Q91XB0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trex1Q91XB0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.46■■□□□ 1.83
Trex1Q91XB0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trex1Q91XB0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Trex1Q91XB0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trex1Q91XB0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trex1Q91XB0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trex1Q91XB0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trex1Q91XB0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trex1Q91XB0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.43■■□□□ 1.82
Trex1Q91XB0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trex1Q91XB0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Trex1Q91XB0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.42■■□□□ 1.82
Trex1Q91XB0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trex1Q91XB0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Trex1Q91XB0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trex1Q91XB0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Trex1Q91XB0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trex1Q91XB0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.39■■□□□ 1.82
Trex1Q91XB0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
Trex1Q91XB0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
Trex1Q91XB0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trex1Q91XB0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Trex1Q91XB0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trex1Q91XB0 Gm5921-201ENSMUST00000075898 882 ntBASIC26.36■■□□□ 1.81
Trex1Q91XB0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trex1Q91XB0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.35■■□□□ 1.81
Trex1Q91XB0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trex1Q91XB0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trex1Q91XB0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
Trex1Q91XB0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trex1Q91XB0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trex1Q91XB0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Trex1Q91XB0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.35■■□□□ 1.81
Trex1Q91XB0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trex1Q91XB0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Trex1Q91XB0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trex1Q91XB0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.34■■□□□ 1.81
Trex1Q91XB0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Trex1Q91XB0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trex1Q91XB0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.34■■□□□ 1.81
Trex1Q91XB0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Trex1Q91XB0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trex1Q91XB0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trex1Q91XB0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Trex1Q91XB0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trex1Q91XB0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trex1Q91XB0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trex1Q91XB0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trex1Q91XB0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trex1Q91XB0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trex1Q91XB0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Trex1Q91XB0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Trex1Q91XB0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.29■■□□□ 1.8
Trex1Q91XB0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trex1Q91XB0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trex1Q91XB0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trex1Q91XB0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Trex1Q91XB0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trex1Q91XB0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trex1Q91XB0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trex1Q91XB0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Trex1Q91XB0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trex1Q91XB0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trex1Q91XB0 Gm5812-201ENSMUST00000061073 957 ntBASIC26.24■■□□□ 1.79
Trex1Q91XB0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trex1Q91XB0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trex1Q91XB0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Trex1Q91XB0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Trex1Q91XB0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trex1Q91XB0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trex1Q91XB0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Trex1Q91XB0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms