Protein–RNA interactions for Protein: Q8IYE1

CCDC13, Coiled-coil domain-containing protein 13, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13Q8IYE1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.93■■□□□ 1.74
CCDC13Q8IYE1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.93■■□□□ 1.74
CCDC13Q8IYE1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.92■■□□□ 1.74
CCDC13Q8IYE1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.92■■□□□ 1.74
CCDC13Q8IYE1 AC110285.7-201ENST00000624417 1536 ntBASIC25.92■■□□□ 1.74
CCDC13Q8IYE1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCDC13Q8IYE1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC13Q8IYE1 ZNRF2P2-203ENST00000454624 420 ntBASIC25.91■■□□□ 1.74
CCDC13Q8IYE1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.91■■□□□ 1.74
CCDC13Q8IYE1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.91■■□□□ 1.74
CCDC13Q8IYE1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC13Q8IYE1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC13Q8IYE1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCDC13Q8IYE1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC13Q8IYE1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC13Q8IYE1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CCDC13Q8IYE1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC13Q8IYE1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC13Q8IYE1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.9■■□□□ 1.74
CCDC13Q8IYE1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCDC13Q8IYE1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
CCDC13Q8IYE1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC13Q8IYE1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
CCDC13Q8IYE1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC13Q8IYE1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC13Q8IYE1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC13Q8IYE1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.88■■□□□ 1.73
CCDC13Q8IYE1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCDC13Q8IYE1 ABHD17AP4-201ENST00000411545 909 ntBASIC25.87■■□□□ 1.73
CCDC13Q8IYE1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC13Q8IYE1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.87■■□□□ 1.73
CCDC13Q8IYE1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.87■■□□□ 1.73
CCDC13Q8IYE1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCDC13Q8IYE1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC13Q8IYE1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC13Q8IYE1 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.86■■□□□ 1.73
CCDC13Q8IYE1 AC018358.1-201ENST00000631079 1402 ntBASIC25.86■■□□□ 1.73
CCDC13Q8IYE1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCDC13Q8IYE1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
CCDC13Q8IYE1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CCDC13Q8IYE1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CCDC13Q8IYE1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.85■■□□□ 1.73
CCDC13Q8IYE1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC13Q8IYE1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CCDC13Q8IYE1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.85■■□□□ 1.73
CCDC13Q8IYE1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCDC13Q8IYE1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCDC13Q8IYE1 AL449106.1-201ENST00000608517 1980 ntBASIC25.84■■□□□ 1.73
CCDC13Q8IYE1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.84■■□□□ 1.73
CCDC13Q8IYE1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
CCDC13Q8IYE1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.84■■□□□ 1.73
CCDC13Q8IYE1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC13Q8IYE1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CCDC13Q8IYE1 DUX4L11-201ENST00000611504 1267 ntBASIC25.83■■□□□ 1.73
CCDC13Q8IYE1 DUX4L12-201ENST00000614593 1267 ntBASIC25.83■■□□□ 1.73
CCDC13Q8IYE1 DUX4L14-201ENST00000621227 1267 ntBASIC25.83■■□□□ 1.73
CCDC13Q8IYE1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CCDC13Q8IYE1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.83■■□□□ 1.73
CCDC13Q8IYE1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CCDC13Q8IYE1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L13-201ENST00000554103 1267 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L15-201ENST00000611059 1267 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L23-201ENST00000615195 1269 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L24-201ENST00000617576 1269 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L22-201ENST00000618238 1269 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L20-201ENST00000619712 1269 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L21-201ENST00000622058 1269 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L10-201ENST00000622460 1267 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 DUX4L25-201ENST00000624915 1269 ntBASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.82■■□□□ 1.72
CCDC13Q8IYE1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC13Q8IYE1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CCDC13Q8IYE1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC13Q8IYE1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC13Q8IYE1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
CCDC13Q8IYE1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC13Q8IYE1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.8■■□□□ 1.72
CCDC13Q8IYE1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC13Q8IYE1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.8■■□□□ 1.72
CCDC13Q8IYE1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC13Q8IYE1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC13Q8IYE1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC13Q8IYE1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CCDC13Q8IYE1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.78■■□□□ 1.72
CCDC13Q8IYE1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC13Q8IYE1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC13Q8IYE1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
CCDC13Q8IYE1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
CCDC13Q8IYE1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.77■■□□□ 1.72
CCDC13Q8IYE1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.77■■□□□ 1.72
CCDC13Q8IYE1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC13Q8IYE1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CCDC13Q8IYE1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.72
CCDC13Q8IYE1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CCDC13Q8IYE1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.75■■□□□ 1.71
CCDC13Q8IYE1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
CCDC13Q8IYE1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms