Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vps9d1Q8C190 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Vps9d1Q8C190 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps9d1Q8C190 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps9d1Q8C190 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps9d1Q8C190 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps9d1Q8C190 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.12■□□□□ 0.97
Vps9d1Q8C190 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vps9d1Q8C190 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps9d1Q8C190 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.11■□□□□ 0.97
Vps9d1Q8C190 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps9d1Q8C190 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps9d1Q8C190 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vps9d1Q8C190 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps9d1Q8C190 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vps9d1Q8C190 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps9d1Q8C190 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps9d1Q8C190 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vps9d1Q8C190 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.1■□□□□ 0.97
Vps9d1Q8C190 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vps9d1Q8C190 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Vps9d1Q8C190 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.09■□□□□ 0.97
Vps9d1Q8C190 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.08■□□□□ 0.97
Vps9d1Q8C190 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps9d1Q8C190 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.08■□□□□ 0.97
Vps9d1Q8C190 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Vps9d1Q8C190 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vps9d1Q8C190 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Vps9d1Q8C190 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Vps9d1Q8C190 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps9d1Q8C190 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vps9d1Q8C190 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vps9d1Q8C190 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps9d1Q8C190 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Vps9d1Q8C190 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps9d1Q8C190 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vps9d1Q8C190 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Vps9d1Q8C190 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps9d1Q8C190 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vps9d1Q8C190 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps9d1Q8C190 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Vps9d1Q8C190 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
Vps9d1Q8C190 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps9d1Q8C190 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps9d1Q8C190 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Vps9d1Q8C190 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps9d1Q8C190 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Vps9d1Q8C190 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.03■□□□□ 0.96
Vps9d1Q8C190 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Vps9d1Q8C190 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Vps9d1Q8C190 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Vps9d1Q8C190 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Vps9d1Q8C190 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Vps9d1Q8C190 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Vps9d1Q8C190 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Vps9d1Q8C190 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps9d1Q8C190 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps9d1Q8C190 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Vps9d1Q8C190 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Vps9d1Q8C190 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps9d1Q8C190 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Vps9d1Q8C190 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Vps9d1Q8C190 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Vps9d1Q8C190 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21■□□□□ 0.95
Vps9d1Q8C190 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Vps9d1Q8C190 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21■□□□□ 0.95
Vps9d1Q8C190 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Vps9d1Q8C190 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21■□□□□ 0.95
Vps9d1Q8C190 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps9d1Q8C190 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Vps9d1Q8C190 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Vps9d1Q8C190 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Vps9d1Q8C190 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps9d1Q8C190 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.99■□□□□ 0.95
Vps9d1Q8C190 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.98■□□□□ 0.95
Vps9d1Q8C190 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.98■□□□□ 0.95
Vps9d1Q8C190 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.98■□□□□ 0.95
Vps9d1Q8C190 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vps9d1Q8C190 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vps9d1Q8C190 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vps9d1Q8C190 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vps9d1Q8C190 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Vps9d1Q8C190 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.97■□□□□ 0.95
Vps9d1Q8C190 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps9d1Q8C190 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps9d1Q8C190 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps9d1Q8C190 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.96■□□□□ 0.95
Vps9d1Q8C190 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vps9d1Q8C190 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps9d1Q8C190 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps9d1Q8C190 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Vps9d1Q8C190 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.95■□□□□ 0.94
Vps9d1Q8C190 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps9d1Q8C190 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.95■□□□□ 0.94
Vps9d1Q8C190 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps9d1Q8C190 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps9d1Q8C190 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps9d1Q8C190 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps9d1Q8C190 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.94■□□□□ 0.94
Vps9d1Q8C190 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms