Protein–RNA interactions for Protein: Q64131

Runx3, Runt-related transcription factor 3, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx3Q64131 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Runx3Q64131 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.5■■□□□ 1.35
Runx3Q64131 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Runx3Q64131 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Runx3Q64131 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Runx3Q64131 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Runx3Q64131 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.49■■□□□ 1.35
Runx3Q64131 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Runx3Q64131 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.48■■□□□ 1.35
Runx3Q64131 Gm44428-201ENSMUST00000204474 874 ntBASIC23.47■■□□□ 1.35
Runx3Q64131 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Runx3Q64131 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.45■■□□□ 1.35
Runx3Q64131 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Runx3Q64131 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Runx3Q64131 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Runx3Q64131 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.44■■□□□ 1.34
Runx3Q64131 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Runx3Q64131 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Runx3Q64131 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Runx3Q64131 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.43■■□□□ 1.34
Runx3Q64131 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Runx3Q64131 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Runx3Q64131 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Runx3Q64131 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.42■■□□□ 1.34
Runx3Q64131 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.41■■□□□ 1.34
Runx3Q64131 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
Runx3Q64131 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Runx3Q64131 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Runx3Q64131 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Runx3Q64131 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Runx3Q64131 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Runx3Q64131 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.39■■□□□ 1.33
Runx3Q64131 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Runx3Q64131 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Runx3Q64131 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Runx3Q64131 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Runx3Q64131 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.38■■□□□ 1.33
Runx3Q64131 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Runx3Q64131 Gm5921-201ENSMUST00000075898 882 ntBASIC23.37■■□□□ 1.33
Runx3Q64131 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Runx3Q64131 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Runx3Q64131 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Runx3Q64131 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Runx3Q64131 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Runx3Q64131 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Runx3Q64131 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Runx3Q64131 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Runx3Q64131 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Runx3Q64131 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Runx3Q64131 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Runx3Q64131 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.33■■□□□ 1.33
Runx3Q64131 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.33■■□□□ 1.33
Runx3Q64131 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Runx3Q64131 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Runx3Q64131 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Runx3Q64131 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.32■■□□□ 1.32
Runx3Q64131 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Runx3Q64131 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.32■■□□□ 1.32
Runx3Q64131 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Runx3Q64131 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Runx3Q64131 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Runx3Q64131 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Runx3Q64131 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Runx3Q64131 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Runx3Q64131 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Runx3Q64131 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Runx3Q64131 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Runx3Q64131 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Runx3Q64131 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Runx3Q64131 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Runx3Q64131 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Runx3Q64131 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Runx3Q64131 Gm5812-201ENSMUST00000061073 957 ntBASIC23.26■■□□□ 1.31
Runx3Q64131 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Runx3Q64131 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Runx3Q64131 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Runx3Q64131 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Runx3Q64131 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Runx3Q64131 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Runx3Q64131 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Runx3Q64131 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Runx3Q64131 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Runx3Q64131 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Runx3Q64131 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Runx3Q64131 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Runx3Q64131 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Runx3Q64131 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Runx3Q64131 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Runx3Q64131 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Runx3Q64131 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.23■■□□□ 1.31
Runx3Q64131 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Runx3Q64131 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Runx3Q64131 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
Runx3Q64131 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Runx3Q64131 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Runx3Q64131 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Runx3Q64131 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Runx3Q64131 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Runx3Q64131 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Runx3Q64131 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms