Protein–RNA interactions for Protein: Q5YD48

A1cf, APOBEC1 complementation factor, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1cfQ5YD48 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
A1cfQ5YD48 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
A1cfQ5YD48 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
A1cfQ5YD48 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
A1cfQ5YD48 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
A1cfQ5YD48 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
A1cfQ5YD48 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
A1cfQ5YD48 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
A1cfQ5YD48 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.64■■□□□ 1.7
A1cfQ5YD48 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.64■■□□□ 1.7
A1cfQ5YD48 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
A1cfQ5YD48 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.64■■□□□ 1.7
A1cfQ5YD48 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
A1cfQ5YD48 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.63■■□□□ 1.69
A1cfQ5YD48 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
A1cfQ5YD48 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
A1cfQ5YD48 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
A1cfQ5YD48 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
A1cfQ5YD48 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
A1cfQ5YD48 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.61■■□□□ 1.69
A1cfQ5YD48 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
A1cfQ5YD48 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
A1cfQ5YD48 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
A1cfQ5YD48 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
A1cfQ5YD48 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
A1cfQ5YD48 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
A1cfQ5YD48 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
A1cfQ5YD48 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
A1cfQ5YD48 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
A1cfQ5YD48 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
A1cfQ5YD48 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
A1cfQ5YD48 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.59■■□□□ 1.69
A1cfQ5YD48 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
A1cfQ5YD48 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
A1cfQ5YD48 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
A1cfQ5YD48 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.57■■□□□ 1.68
A1cfQ5YD48 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
A1cfQ5YD48 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.57■■□□□ 1.68
A1cfQ5YD48 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
A1cfQ5YD48 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.56■■□□□ 1.68
A1cfQ5YD48 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
A1cfQ5YD48 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.55■■□□□ 1.68
A1cfQ5YD48 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.55■■□□□ 1.68
A1cfQ5YD48 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
A1cfQ5YD48 Gm10420-201ENSMUST00000121713 882 ntBASIC25.53■■□□□ 1.68
A1cfQ5YD48 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
A1cfQ5YD48 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
A1cfQ5YD48 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
A1cfQ5YD48 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.51■■□□□ 1.67
A1cfQ5YD48 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
A1cfQ5YD48 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
A1cfQ5YD48 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.51■■□□□ 1.67
A1cfQ5YD48 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.5■■□□□ 1.67
A1cfQ5YD48 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
A1cfQ5YD48 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
A1cfQ5YD48 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
A1cfQ5YD48 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.49■■□□□ 1.67
A1cfQ5YD48 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
A1cfQ5YD48 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
A1cfQ5YD48 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
A1cfQ5YD48 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
A1cfQ5YD48 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
A1cfQ5YD48 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
A1cfQ5YD48 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.48■■□□□ 1.67
A1cfQ5YD48 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
A1cfQ5YD48 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
A1cfQ5YD48 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
A1cfQ5YD48 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
A1cfQ5YD48 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
A1cfQ5YD48 Gm44428-201ENSMUST00000204474 874 ntBASIC25.45■■□□□ 1.66
A1cfQ5YD48 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
A1cfQ5YD48 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
A1cfQ5YD48 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
A1cfQ5YD48 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
A1cfQ5YD48 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.43■■□□□ 1.66
A1cfQ5YD48 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
A1cfQ5YD48 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.42■■□□□ 1.66
A1cfQ5YD48 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.42■■□□□ 1.66
A1cfQ5YD48 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
A1cfQ5YD48 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
A1cfQ5YD48 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
A1cfQ5YD48 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
A1cfQ5YD48 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
A1cfQ5YD48 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
A1cfQ5YD48 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
A1cfQ5YD48 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
A1cfQ5YD48 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
A1cfQ5YD48 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
A1cfQ5YD48 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
A1cfQ5YD48 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
A1cfQ5YD48 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
A1cfQ5YD48 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.36■■□□□ 1.65
A1cfQ5YD48 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
A1cfQ5YD48 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
A1cfQ5YD48 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
A1cfQ5YD48 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
A1cfQ5YD48 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
A1cfQ5YD48 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
A1cfQ5YD48 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.35■■□□□ 1.65
A1cfQ5YD48 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms