Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lin28bQ45KJ6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lin28bQ45KJ6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lin28bQ45KJ6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lin28bQ45KJ6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lin28bQ45KJ6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lin28bQ45KJ6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lin28bQ45KJ6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Lin28bQ45KJ6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lin28bQ45KJ6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Lin28bQ45KJ6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28bQ45KJ6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.69■■□□□ 1.06
Lin28bQ45KJ6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lin28bQ45KJ6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Lin28bQ45KJ6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lin28bQ45KJ6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lin28bQ45KJ6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28bQ45KJ6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Lin28bQ45KJ6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28bQ45KJ6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28bQ45KJ6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28bQ45KJ6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Lin28bQ45KJ6 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.67■■□□□ 1.06
Lin28bQ45KJ6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lin28bQ45KJ6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lin28bQ45KJ6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lin28bQ45KJ6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lin28bQ45KJ6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lin28bQ45KJ6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lin28bQ45KJ6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.66■■□□□ 1.06
Lin28bQ45KJ6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lin28bQ45KJ6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lin28bQ45KJ6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Lin28bQ45KJ6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.65■■□□□ 1.06
Lin28bQ45KJ6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.65■■□□□ 1.06
Lin28bQ45KJ6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lin28bQ45KJ6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lin28bQ45KJ6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lin28bQ45KJ6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lin28bQ45KJ6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.64■■□□□ 1.06
Lin28bQ45KJ6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lin28bQ45KJ6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.64■■□□□ 1.05
Lin28bQ45KJ6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lin28bQ45KJ6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lin28bQ45KJ6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lin28bQ45KJ6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin28bQ45KJ6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lin28bQ45KJ6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lin28bQ45KJ6 Gm10420-201ENSMUST00000121713 882 ntBASIC21.61■■□□□ 1.05
Lin28bQ45KJ6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lin28bQ45KJ6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Lin28bQ45KJ6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin28bQ45KJ6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin28bQ45KJ6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Lin28bQ45KJ6 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.59■■□□□ 1.05
Lin28bQ45KJ6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lin28bQ45KJ6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Lin28bQ45KJ6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Lin28bQ45KJ6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lin28bQ45KJ6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.58■■□□□ 1.05
Lin28bQ45KJ6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lin28bQ45KJ6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Lin28bQ45KJ6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lin28bQ45KJ6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Lin28bQ45KJ6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Lin28bQ45KJ6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Lin28bQ45KJ6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.56■■□□□ 1.04
Lin28bQ45KJ6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lin28bQ45KJ6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin28bQ45KJ6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lin28bQ45KJ6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.54■■□□□ 1.04
Lin28bQ45KJ6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lin28bQ45KJ6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Lin28bQ45KJ6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lin28bQ45KJ6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lin28bQ45KJ6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.53■■□□□ 1.04
Lin28bQ45KJ6 Gm44428-201ENSMUST00000204474 874 ntBASIC21.53■■□□□ 1.04
Lin28bQ45KJ6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lin28bQ45KJ6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Lin28bQ45KJ6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lin28bQ45KJ6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lin28bQ45KJ6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lin28bQ45KJ6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lin28bQ45KJ6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lin28bQ45KJ6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lin28bQ45KJ6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.5■■□□□ 1.03
Lin28bQ45KJ6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lin28bQ45KJ6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.49■■□□□ 1.03
Lin28bQ45KJ6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.49■■□□□ 1.03
Lin28bQ45KJ6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lin28bQ45KJ6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Lin28bQ45KJ6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms