Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.55■□□□□ 0.88
Pkd1l3Q2EG98 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pkd1l3Q2EG98 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.55■□□□□ 0.88
Pkd1l3Q2EG98 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.54■□□□□ 0.88
Pkd1l3Q2EG98 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.54■□□□□ 0.88
Pkd1l3Q2EG98 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Pkd1l3Q2EG98 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pkd1l3Q2EG98 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkd1l3Q2EG98 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkd1l3Q2EG98 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkd1l3Q2EG98 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkd1l3Q2EG98 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkd1l3Q2EG98 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkd1l3Q2EG98 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.52■□□□□ 0.88
Pkd1l3Q2EG98 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pkd1l3Q2EG98 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pkd1l3Q2EG98 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.52■□□□□ 0.88
Pkd1l3Q2EG98 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Pkd1l3Q2EG98 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pkd1l3Q2EG98 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pkd1l3Q2EG98 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pkd1l3Q2EG98 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pkd1l3Q2EG98 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pkd1l3Q2EG98 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.49■□□□□ 0.87
Pkd1l3Q2EG98 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pkd1l3Q2EG98 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pkd1l3Q2EG98 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.49■□□□□ 0.87
Pkd1l3Q2EG98 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pkd1l3Q2EG98 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Pkd1l3Q2EG98 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.49■□□□□ 0.87
Pkd1l3Q2EG98 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pkd1l3Q2EG98 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.48■□□□□ 0.87
Pkd1l3Q2EG98 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Pkd1l3Q2EG98 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd1l3Q2EG98 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd1l3Q2EG98 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd1l3Q2EG98 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd1l3Q2EG98 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd1l3Q2EG98 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Pkd1l3Q2EG98 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd1l3Q2EG98 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.46■□□□□ 0.87
Pkd1l3Q2EG98 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd1l3Q2EG98 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd1l3Q2EG98 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd1l3Q2EG98 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pkd1l3Q2EG98 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.44■□□□□ 0.86
Pkd1l3Q2EG98 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pkd1l3Q2EG98 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pkd1l3Q2EG98 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pkd1l3Q2EG98 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.43■□□□□ 0.86
Pkd1l3Q2EG98 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pkd1l3Q2EG98 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.42■□□□□ 0.86
Pkd1l3Q2EG98 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pkd1l3Q2EG98 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pkd1l3Q2EG98 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pkd1l3Q2EG98 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pkd1l3Q2EG98 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pkd1l3Q2EG98 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Pkd1l3Q2EG98 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pkd1l3Q2EG98 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pkd1l3Q2EG98 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Pkd1l3Q2EG98 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pkd1l3Q2EG98 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.4■□□□□ 0.86
Pkd1l3Q2EG98 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.39■□□□□ 0.85
Pkd1l3Q2EG98 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pkd1l3Q2EG98 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pkd1l3Q2EG98 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pkd1l3Q2EG98 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pkd1l3Q2EG98 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pkd1l3Q2EG98 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pkd1l3Q2EG98 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pkd1l3Q2EG98 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.37■□□□□ 0.85
Pkd1l3Q2EG98 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pkd1l3Q2EG98 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pkd1l3Q2EG98 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.37■□□□□ 0.85
Pkd1l3Q2EG98 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pkd1l3Q2EG98 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pkd1l3Q2EG98 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pkd1l3Q2EG98 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pkd1l3Q2EG98 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pkd1l3Q2EG98 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pkd1l3Q2EG98 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.35■□□□□ 0.85
Pkd1l3Q2EG98 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pkd1l3Q2EG98 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pkd1l3Q2EG98 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pkd1l3Q2EG98 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pkd1l3Q2EG98 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pkd1l3Q2EG98 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pkd1l3Q2EG98 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pkd1l3Q2EG98 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pkd1l3Q2EG98 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pkd1l3Q2EG98 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms