Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC31.77■■■□□ 2.68
Nphp4P59240 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Nphp4P59240 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
Nphp4P59240 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC31.75■■■□□ 2.67
Nphp4P59240 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC31.75■■■□□ 2.67
Nphp4P59240 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
Nphp4P59240 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC31.74■■■□□ 2.67
Nphp4P59240 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
Nphp4P59240 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Nphp4P59240 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31.73■■■□□ 2.67
Nphp4P59240 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Nphp4P59240 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Nphp4P59240 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Nphp4P59240 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC31.71■■■□□ 2.67
Nphp4P59240 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Nphp4P59240 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Nphp4P59240 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Nphp4P59240 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
Nphp4P59240 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC31.7■■■□□ 2.67
Nphp4P59240 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC31.69■■■□□ 2.66
Nphp4P59240 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Nphp4P59240 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Nphp4P59240 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC31.68■■■□□ 2.66
Nphp4P59240 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Nphp4P59240 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Nphp4P59240 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Nphp4P59240 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Nphp4P59240 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Nphp4P59240 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Nphp4P59240 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC31.66■■■□□ 2.66
Nphp4P59240 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Nphp4P59240 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Nphp4P59240 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Nphp4P59240 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC31.65■■■□□ 2.66
Nphp4P59240 Gm44428-201ENSMUST00000204474 874 ntBASIC31.65■■■□□ 2.66
Nphp4P59240 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Nphp4P59240 Gm10420-201ENSMUST00000121713 882 ntBASIC31.64■■■□□ 2.66
Nphp4P59240 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Nphp4P59240 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Nphp4P59240 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
Nphp4P59240 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
Nphp4P59240 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Nphp4P59240 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Nphp4P59240 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Nphp4P59240 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Nphp4P59240 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
Nphp4P59240 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Nphp4P59240 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Nphp4P59240 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Nphp4P59240 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Nphp4P59240 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Nphp4P59240 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Nphp4P59240 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Nphp4P59240 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Nphp4P59240 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
Nphp4P59240 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
Nphp4P59240 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Nphp4P59240 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC31.57■■■□□ 2.64
Nphp4P59240 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Nphp4P59240 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Nphp4P59240 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC31.57■■■□□ 2.64
Nphp4P59240 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
Nphp4P59240 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC31.56■■■□□ 2.64
Nphp4P59240 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC31.56■■■□□ 2.64
Nphp4P59240 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Nphp4P59240 AC122428.3-201ENSMUST00000215551 2290 ntBASIC31.55■■■□□ 2.64
Nphp4P59240 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Nphp4P59240 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.55■■■□□ 2.64
Nphp4P59240 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC31.55■■■□□ 2.64
Nphp4P59240 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Nphp4P59240 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Nphp4P59240 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC31.54■■■□□ 2.64
Nphp4P59240 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Nphp4P59240 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Nphp4P59240 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Nphp4P59240 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Nphp4P59240 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Nphp4P59240 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Nphp4P59240 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Nphp4P59240 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Nphp4P59240 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Nphp4P59240 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC31.49■■■□□ 2.63
Nphp4P59240 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Nphp4P59240 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Nphp4P59240 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Nphp4P59240 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Nphp4P59240 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Nphp4P59240 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Nphp4P59240 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Nphp4P59240 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Nphp4P59240 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Nphp4P59240 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Nphp4P59240 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC31.45■■■□□ 2.63
Nphp4P59240 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Nphp4P59240 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Nphp4P59240 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
Nphp4P59240 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Nphp4P59240 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Nphp4P59240 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC31.42■■■□□ 2.62
Nphp4P59240 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms