Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 FLC2YAL053W 2352 nt7.1□□□□□ -1.27
UPF3P48412 POB3YML069W 1659 nt7.1□□□□□ -1.27
UPF3P48412 ERG24YNL280C 1317 nt7.1□□□□□ -1.27
UPF3P48412 YKL147CYKL147C 618 nt7.1□□□□□ -1.27
UPF3P48412 REC114YMR133W 1287 nt7.1□□□□□ -1.27
UPF3P48412 AQR1YNL065W 1761 nt7.1□□□□□ -1.27
UPF3P48412 HEL1YKR017C 1656 nt7.09□□□□□ -1.27
UPF3P48412 YCR061WYCR061W 1896 nt7.09□□□□□ -1.27
UPF3P48412 PPZ2YDR436W 2133 nt7.09□□□□□ -1.27
UPF3P48412 YPT10YBR264C 600 nt7.09□□□□□ -1.27
UPF3P48412 AFG3YER017C 2286 nt7.09□□□□□ -1.27
UPF3P48412 RGT2YDL138W 2292 nt7.08□□□□□ -1.28
UPF3P48412 YER137CYER137C 447 nt7.08□□□□□ -1.28
UPF3P48412 FCP1YMR277W 2199 nt7.08□□□□□ -1.28
UPF3P48412 TOD6YBL054W 1578 nt7.08□□□□□ -1.28
UPF3P48412 SPS1YDR523C 1473 nt7.07□□□□□ -1.28
UPF3P48412 CHS5YLR330W 2016 nt7.07□□□□□ -1.28
UPF3P48412 PSA1YDL055C 1086 nt7.07□□□□□ -1.28
UPF3P48412 YDR476CYDR476C 675 nt7.07□□□□□ -1.28
UPF3P48412 CSM2YIL132C 642 nt7.07□□□□□ -1.28
UPF3P48412 PRY2YKR013W 990 nt7.07□□□□□ -1.28
UPF3P48412 RMD8YFR048W 1989 nt7.06□□□□□ -1.28
UPF3P48412 DSC3YOR223W 879 nt7.06□□□□□ -1.28
UPF3P48412 ATP4YPL078C 735 nt7.06□□□□□ -1.28
UPF3P48412 ERV2YPR037C 591 nt7.06□□□□□ -1.28
UPF3P48412 PET494YNR045W 1470 nt7.05□□□□□ -1.28
UPF3P48412 OPT1YJL212C 2400 nt7.05□□□□□ -1.28
UPF3P48412 ENB1YOL158C 1821 nt7.05□□□□□ -1.28
UPF3P48412 YEL009C-AYEL009C-A 408 nt7.04□□□□□ -1.28
UPF3P48412 STS1YIR011C 960 nt7.04□□□□□ -1.28
UPF3P48412 YOS9YDR057W 1629 nt7.04□□□□□ -1.28
UPF3P48412 ASN2YGR124W 1719 nt7.04□□□□□ -1.28
UPF3P48412 HGH1YGR187C 1185 nt7.03□□□□□ -1.28
UPF3P48412 LIP5YOR196C 1245 nt7.03□□□□□ -1.28
UPF3P48412 ATG17YLR423C 1254 nt7.02□□□□□ -1.29
UPF3P48412 NSE5YML023C 1671 nt7.02□□□□□ -1.29
UPF3P48412 BNA3YJL060W 1335 nt7.01□□□□□ -1.29
UPF3P48412 LOT6YLR011W 576 nt7.01□□□□□ -1.29
UPF3P48412 YJL211CYJL211C 444 nt7□□□□□ -1.29
UPF3P48412 MHP1YJL042W 4197 nt7□□□□□ -1.29
UPF3P48412 TFC6YDR362C 2019 nt7□□□□□ -1.29
UPF3P48412 HRB1YNL004W 1365 nt6.99□□□□□ -1.29
UPF3P48412 FCY2YER056C 1602 nt6.99□□□□□ -1.29
UPF3P48412 NMA2YGR010W 1188 nt6.99□□□□□ -1.29
UPF3P48412 NCA3YJL116C 1014 nt6.99□□□□□ -1.29
UPF3P48412 YJR142WYJR142W 1029 nt6.99□□□□□ -1.29
UPF3P48412 KAE1YKR038C 1161 nt6.99□□□□□ -1.29
UPF3P48412 OST3YOR085W 1053 nt6.99□□□□□ -1.29
UPF3P48412 YOR268CYOR268C 399 nt6.99□□□□□ -1.29
UPF3P48412 NUP57YGR119C 1626 nt6.98□□□□□ -1.29
UPF3P48412 YNR001W-AYNR001W-A 219 nt6.98□□□□□ -1.29
UPF3P48412 GPA1YHR005C 1419 nt6.98□□□□□ -1.29
UPF3P48412 OSM1YJR051W 1506 nt6.97□□□□□ -1.29
UPF3P48412 SKP1YDR328C 585 nt6.97□□□□□ -1.29
UPF3P48412 LCP5YER127W 1074 nt6.97□□□□□ -1.29
UPF3P48412 MSI1YBR195C 1269 nt6.97□□□□□ -1.29
UPF3P48412 SPS22YCL048W 1392 nt6.96□□□□□ -1.29
UPF3P48412 YBL111CYBL111C 2004 nt6.96□□□□□ -1.29
UPF3P48412 ATF1YOR377W 1578 nt6.96□□□□□ -1.29
UPF3P48412 AGP2YBR132C 1791 nt6.96□□□□□ -1.3
UPF3P48412 YCR041WYCR041W 333 nt6.96□□□□□ -1.3
UPF3P48412 YDR401WYDR401W 564 nt6.96□□□□□ -1.3
UPF3P48412 BNS1YGR230W 414 nt6.96□□□□□ -1.3
UPF3P48412 YJL213WYJL213W 996 nt6.96□□□□□ -1.3
UPF3P48412 HST2YPL015C 1074 nt6.96□□□□□ -1.3
UPF3P48412 NMD5YJR132W 3147 nt6.95□□□□□ -1.3
UPF3P48412 RDR1YOR380W 1641 nt6.95□□□□□ -1.3
UPF3P48412 GAA1YLR088W 1845 nt6.95□□□□□ -1.3
UPF3P48412 ORM1YGR038W 669 nt6.95□□□□□ -1.3
UPF3P48412 PIL1YGR086C 1020 nt6.95□□□□□ -1.3
UPF3P48412 RSC2YLR357W 2670 nt6.95□□□□□ -1.3
UPF3P48412 AI5_BETAQ0075 1065 nt6.94□□□□□ -1.3
UPF3P48412 SUF3tG(CCC)D 72 nt6.94□□□□□ -1.3
UPF3P48412 DOC1YGL240W 753 nt6.94□□□□□ -1.3
UPF3P48412 PIH1YHR034C 1035 nt6.94□□□□□ -1.3
UPF3P48412 CCW12YLR110C 402 nt6.94□□□□□ -1.3
UPF3P48412 YMR074CYMR074C 438 nt6.94□□□□□ -1.3
UPF3P48412 RFS1YBR052C 633 nt6.94□□□□□ -1.3
UPF3P48412 CMR1YDL156W 1569 nt6.94□□□□□ -1.3
UPF3P48412 EXG2YDR261C 1689 nt6.93□□□□□ -1.3
UPF3P48412 CDC7YDL017W 1524 nt6.93□□□□□ -1.3
UPF3P48412 YLR112WYLR112W 420 nt6.93□□□□□ -1.3
UPF3P48412 YFL052WYFL052W 1398 nt6.93□□□□□ -1.3
UPF3P48412 CDC3YLR314C 1563 nt6.92□□□□□ -1.3
UPF3P48412 ACO1YLR304C 2337 nt6.92□□□□□ -1.3
UPF3P48412 YLR358CYLR358C 564 nt6.92□□□□□ -1.3
UPF3P48412 SUN4YNL066W 1263 nt6.92□□□□□ -1.3
UPF3P48412 EDC3YEL015W 1656 nt6.92□□□□□ -1.3
UPF3P48412 SNF4YGL115W 969 nt6.91□□□□□ -1.3
UPF3P48412 TOS2YGR221C 1869 nt6.91□□□□□ -1.3
UPF3P48412 ICL2YPR006C 1728 nt6.9□□□□□ -1.3
UPF3P48412 YGL081WYGL081W 963 nt6.9□□□□□ -1.3
UPF3P48412 EEB1YPL095C 1371 nt6.9□□□□□ -1.31
UPF3P48412 NUP84YDL116W 2181 nt6.89□□□□□ -1.31
UPF3P48412 YOR012WYOR012W 414 nt6.89□□□□□ -1.31
UPF3P48412 PHO85YPL031C 918 nt6.89□□□□□ -1.31
UPF3P48412 HSM3YBR272C 1443 nt6.89□□□□□ -1.31
UPF3P48412 PGI1YBR196C 1665 nt6.89□□□□□ -1.31
UPF3P48412 CIT2YCR005C 1383 nt6.88□□□□□ -1.31
UPF3P48412 PET117YER058W 324 nt6.88□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 45.4 ms