Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 TOS2YGR221C 1869 nt7.09□□□□□ -1.28
TDA11P38854 TOS1YBR162C 1368 nt7.08□□□□□ -1.28
TDA11P38854 FPR2YDR519W 408 nt7.08□□□□□ -1.28
TDA11P38854 CTF8YHR191C 402 nt7.08□□□□□ -1.28
TDA11P38854 JHD1YER051W 1479 nt7.08□□□□□ -1.28
TDA11P38854 CCT3YJL014W 1605 nt7.08□□□□□ -1.28
TDA11P38854 ERS1YCR075C 783 nt7.07□□□□□ -1.28
TDA11P38854 YPT31YER031C 672 nt7.07□□□□□ -1.28
TDA11P38854 YJR154WYJR154W 1041 nt7.07□□□□□ -1.28
TDA11P38854 YAL045CYAL045C 309 nt7.07□□□□□ -1.28
TDA11P38854 OPI11YPR044C 354 nt7.07□□□□□ -1.28
TDA11P38854 ARP3YJR065C 1350 nt7.07□□□□□ -1.28
TDA11P38854 YBR241CYBR241C 1467 nt7.05□□□□□ -1.28
TDA11P38854 OPI1YHL020C 1215 nt7.05□□□□□ -1.28
TDA11P38854 AMN1YBR158W 1650 nt7.05□□□□□ -1.28
TDA11P38854 PET494YNR045W 1470 nt7.04□□□□□ -1.28
TDA11P38854 HSM3YBR272C 1443 nt7.03□□□□□ -1.28
TDA11P38854 PRE5YMR314W 705 nt7.03□□□□□ -1.28
TDA11P38854 SUN4YNL066W 1263 nt7.03□□□□□ -1.28
TDA11P38854 BDS1YOL164W 1941 nt7.02□□□□□ -1.29
TDA11P38854 SUR7YML052W 909 nt7.02□□□□□ -1.29
TDA11P38854 HEL1YKR017C 1656 nt7.02□□□□□ -1.29
TDA11P38854 RDR1YOR380W 1641 nt7.01□□□□□ -1.29
TDA11P38854 MHP1YJL042W 4197 nt7.01□□□□□ -1.29
TDA11P38854 YPL247CYPL247C 1572 nt7.01□□□□□ -1.29
TDA11P38854 GTT3YEL017W 1014 nt7.01□□□□□ -1.29
TDA11P38854 HSP12YFL014W 330 nt7.01□□□□□ -1.29
TDA11P38854 HMS2YJR147W 1077 nt7.01□□□□□ -1.29
TDA11P38854 PMU1YKL128C 888 nt7.01□□□□□ -1.29
TDA11P38854 PHO85YPL031C 918 nt7.01□□□□□ -1.29
TDA11P38854 HBN1YCL026C-B 582 nt7.01□□□□□ -1.29
TDA11P38854 TDP1YBR223C 1635 nt7.01□□□□□ -1.29
TDA11P38854 VMA2YBR127C 1554 nt7□□□□□ -1.29
TDA11P38854 STE3YKL178C 1413 nt7□□□□□ -1.29
TDA11P38854 CEM1YER061C 1329 nt7□□□□□ -1.29
TDA11P38854 CDC7YDL017W 1524 nt6.99□□□□□ -1.29
TDA11P38854 GUT1YHL032C 2130 nt6.98□□□□□ -1.29
TDA11P38854 YIL168WYIL168W 384 nt6.98□□□□□ -1.29
TDA11P38854 OPI8YKR035C 642 nt6.98□□□□□ -1.29
TDA11P38854 PSP2YML017W 1782 nt6.97□□□□□ -1.29
TDA11P38854 SLA2YNL243W 2907 nt6.97□□□□□ -1.29
TDA11P38854 YML034C-AYML034C-A 399 nt6.97□□□□□ -1.29
TDA11P38854 YNR014WYNR014W 639 nt6.97□□□□□ -1.29
TDA11P38854 AVT4YNL101W 2142 nt6.97□□□□□ -1.29
TDA11P38854 YNL295WYNL295W 1575 nt6.96□□□□□ -1.29
TDA11P38854 PHO3YBR092C 1404 nt6.96□□□□□ -1.3
TDA11P38854 YDR476CYDR476C 675 nt6.96□□□□□ -1.3
TDA11P38854 TPK1YJL164C 1194 nt6.96□□□□□ -1.3
TDA11P38854 MRPL28YDR462W 444 nt6.95□□□□□ -1.3
TDA11P38854 PGI1YBR196C 1665 nt6.94□□□□□ -1.3
TDA11P38854 GET2YER083C 858 nt6.94□□□□□ -1.3
TDA11P38854 COX16YJL003W 357 nt6.94□□□□□ -1.3
TDA11P38854 YPR127WYPR127W 1038 nt6.94□□□□□ -1.3
TDA11P38854 SDH8YBR269C 417 nt6.94□□□□□ -1.3
TDA11P38854 FCY22YER060W-A 1593 nt6.94□□□□□ -1.3
TDA11P38854 RPR1RPR1 369 nt6.93□□□□□ -1.3
TDA11P38854 YNL200CYNL200C 741 nt6.93□□□□□ -1.3
TDA11P38854 INP54YOL065C 1155 nt6.93□□□□□ -1.3
TDA11P38854 IRC5YFR038W 2562 nt6.92□□□□□ -1.3
TDA11P38854 YMR074CYMR074C 438 nt6.92□□□□□ -1.3
TDA11P38854 CPT1YNL130C 1182 nt6.92□□□□□ -1.3
TDA11P38854 ECM27YJR106W 2178 nt6.92□□□□□ -1.3
TDA11P38854 HAC1YFL031W 717 nt6.91□□□□□ -1.3
TDA11P38854 MIX17YMR002W 471 nt6.91□□□□□ -1.3
TDA11P38854 NOG2YNR053C 1461 nt6.91□□□□□ -1.3
TDA11P38854 YEL023CYEL023C 2049 nt6.9□□□□□ -1.3
TDA11P38854 KNS1YLL019C 2214 nt6.9□□□□□ -1.3
TDA11P38854 PPH22YDL188C 1134 nt6.89□□□□□ -1.31
TDA11P38854 TKL2YBR117C 2046 nt6.88□□□□□ -1.31
TDA11P38854 CEF1YMR213W 1773 nt6.88□□□□□ -1.31
TDA11P38854 SPR1YOR190W 1338 nt6.88□□□□□ -1.31
TDA11P38854 RDN5-2RDN5-2 119 nt6.88□□□□□ -1.31
TDA11P38854 RDN5-3RDN5-3 119 nt6.88□□□□□ -1.31
TDA11P38854 RDN5-4RDN5-4 119 nt6.88□□□□□ -1.31
TDA11P38854 RDN5-5RDN5-5 119 nt6.88□□□□□ -1.31
TDA11P38854 RPL5YPL131W 894 nt6.88□□□□□ -1.31
TDA11P38854 ISC1YER019W 1434 nt6.87□□□□□ -1.31
TDA11P38854 STF1YDL130W-A 261 nt6.87□□□□□ -1.31
TDA11P38854 RRP43YCR035C 1185 nt6.86□□□□□ -1.31
TDA11P38854 SUF3tG(CCC)D 72 nt6.86□□□□□ -1.31
TDA11P38854 YUR1YJL139C 1287 nt6.86□□□□□ -1.31
TDA11P38854 DLD1YDL174C 1764 nt6.86□□□□□ -1.31
TDA11P38854 PNS1YOR161C 1620 nt6.86□□□□□ -1.31
TDA11P38854 SGE1YPR198W 1632 nt6.86□□□□□ -1.31
TDA11P38854 MSG5YNL053W 1470 nt6.85□□□□□ -1.31
TDA11P38854 PUP2YGR253C 783 nt6.85□□□□□ -1.31
TDA11P38854 PIH1YHR034C 1035 nt6.85□□□□□ -1.31
TDA11P38854 YLR358CYLR358C 564 nt6.85□□□□□ -1.31
TDA11P38854 YPR204WYPR204W 3099 nt6.85□□□□□ -1.31
TDA11P38854 RGD2YFL047W 2145 nt6.84□□□□□ -1.31
TDA11P38854 ERG27YLR100W 1044 nt6.84□□□□□ -1.31
TDA11P38854 YOL099CYOL099C 492 nt6.83□□□□□ -1.32
TDA11P38854 ARG81YML099C 2643 nt6.83□□□□□ -1.32
TDA11P38854 RAP1YNL216W 2484 nt6.83□□□□□ -1.32
TDA11P38854 CRN1YLR429W 1956 nt6.82□□□□□ -1.32
TDA11P38854 SPS1YDR523C 1473 nt6.82□□□□□ -1.32
TDA11P38854 THR1YHR025W 1074 nt6.82□□□□□ -1.32
TDA11P38854 DYS1YHR068W 1164 nt6.82□□□□□ -1.32
TDA11P38854 YPT10YBR264C 600 nt6.82□□□□□ -1.32
TDA11P38854 HXT2YMR011W 1626 nt6.82□□□□□ -1.32
Retrieved 100 of 7,029 protein–RNA pairs in 54.3 ms