Protein–RNA interactions for Protein: P0CW03

Ly6c2, Lymphocyte antigen 6C2, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c2P0CW03 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ly6c2P0CW03 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ly6c2P0CW03 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.09■□□□□ 0.33
Ly6c2P0CW03 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ly6c2P0CW03 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ly6c2P0CW03 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ly6c2P0CW03 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ly6c2P0CW03 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.09■□□□□ 0.33
Ly6c2P0CW03 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ly6c2P0CW03 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ly6c2P0CW03 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6c2P0CW03 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6c2P0CW03 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.08■□□□□ 0.32
Ly6c2P0CW03 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ly6c2P0CW03 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ly6c2P0CW03 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6c2P0CW03 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ly6c2P0CW03 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.06■□□□□ 0.32
Ly6c2P0CW03 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6c2P0CW03 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6c2P0CW03 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6c2P0CW03 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.05■□□□□ 0.32
Ly6c2P0CW03 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ly6c2P0CW03 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ly6c2P0CW03 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ly6c2P0CW03 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ly6c2P0CW03 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ly6c2P0CW03 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ly6c2P0CW03 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ly6c2P0CW03 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ly6c2P0CW03 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ly6c2P0CW03 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.02■□□□□ 0.32
Ly6c2P0CW03 Gm10420-201ENSMUST00000121713 882 ntBASIC17.02■□□□□ 0.32
Ly6c2P0CW03 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ly6c2P0CW03 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.02■□□□□ 0.31
Ly6c2P0CW03 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ly6c2P0CW03 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ly6c2P0CW03 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ly6c2P0CW03 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17■□□□□ 0.31
Ly6c2P0CW03 Gm44428-201ENSMUST00000204474 874 ntBASIC17■□□□□ 0.31
Ly6c2P0CW03 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ly6c2P0CW03 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ly6c2P0CW03 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ly6c2P0CW03 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ly6c2P0CW03 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ly6c2P0CW03 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ly6c2P0CW03 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ly6c2P0CW03 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.98■□□□□ 0.31
Ly6c2P0CW03 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ly6c2P0CW03 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ly6c2P0CW03 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ly6c2P0CW03 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ly6c2P0CW03 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ly6c2P0CW03 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ly6c2P0CW03 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ly6c2P0CW03 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ly6c2P0CW03 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ly6c2P0CW03 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ly6c2P0CW03 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ly6c2P0CW03 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.96■□□□□ 0.31
Ly6c2P0CW03 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ly6c2P0CW03 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ly6c2P0CW03 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.96■□□□□ 0.3
Ly6c2P0CW03 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Ly6c2P0CW03 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ly6c2P0CW03 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.94■□□□□ 0.3
Ly6c2P0CW03 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ly6c2P0CW03 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ly6c2P0CW03 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC16.94■□□□□ 0.3
Ly6c2P0CW03 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ly6c2P0CW03 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ly6c2P0CW03 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ly6c2P0CW03 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.94■□□□□ 0.3
Ly6c2P0CW03 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ly6c2P0CW03 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ly6c2P0CW03 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ly6c2P0CW03 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ly6c2P0CW03 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.92■□□□□ 0.3
Ly6c2P0CW03 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ly6c2P0CW03 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ly6c2P0CW03 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ly6c2P0CW03 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ly6c2P0CW03 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ly6c2P0CW03 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ly6c2P0CW03 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.91■□□□□ 0.3
Ly6c2P0CW03 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c2P0CW03 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Ly6c2P0CW03 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c2P0CW03 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c2P0CW03 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ly6c2P0CW03 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c2P0CW03 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms