Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.93■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.9■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rpl23a-ps3A0A140T8M7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.84■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rpl23a-ps3A0A140T8M7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.8■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.8■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.8■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.77■□□□□ 0.6
Rpl23a-ps3A0A140T8M7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Rpl23a-ps3A0A140T8M7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Rpl23a-ps3A0A140T8M7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rpl23a-ps3A0A140T8M7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpl23a-ps3A0A140T8M7 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.76■□□□□ 0.59
Rpl23a-ps3A0A140T8M7 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.76■□□□□ 0.59
Rpl23a-ps3A0A140T8M7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpl23a-ps3A0A140T8M7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rpl23a-ps3A0A140T8M7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms