Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAV25A0A0B4J276 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV25A0A0B4J276 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 LINC01003-201ENST00000564834 1764 ntBASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRAV25A0A0B4J276 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV25A0A0B4J276 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRAV25A0A0B4J276 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV25A0A0B4J276 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TRAV25A0A0B4J276 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV25A0A0B4J276 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV25A0A0B4J276 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV25A0A0B4J276 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV25A0A0B4J276 BX255925.1-201ENST00000566954 1854 ntBASIC18.75■□□□□ 0.59
TRAV25A0A0B4J276 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV25A0A0B4J276 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV25A0A0B4J276 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV25A0A0B4J276 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV25A0A0B4J276 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.74■□□□□ 0.59
TRAV25A0A0B4J276 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV25A0A0B4J276 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV25A0A0B4J276 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 AC022413.1-201ENST00000624602 984 ntBASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV25A0A0B4J276 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV25A0A0B4J276 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV25A0A0B4J276 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV25A0A0B4J276 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV25A0A0B4J276 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV25A0A0B4J276 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV25A0A0B4J276 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV25A0A0B4J276 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRAV25A0A0B4J276 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV25A0A0B4J276 GPX1-201ENST00000419349 1106 ntBASIC18.7■□□□□ 0.58
TRAV25A0A0B4J276 AC060814.1-201ENST00000554326 538 ntBASIC18.7■□□□□ 0.58
TRAV25A0A0B4J276 AL359258.2-201ENST00000564063 1566 ntBASIC18.7■□□□□ 0.58
TRAV25A0A0B4J276 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV25A0A0B4J276 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV25A0A0B4J276 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV25A0A0B4J276 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 WHAMMP3-201ENST00000611636 1609 ntBASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV25A0A0B4J276 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV25A0A0B4J276 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV25A0A0B4J276 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV25A0A0B4J276 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV25A0A0B4J276 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV25A0A0B4J276 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV25A0A0B4J276 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV25A0A0B4J276 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV25A0A0B4J276 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV25A0A0B4J276 HSD17B1P1-201ENST00000590052 955 ntBASIC18.67■□□□□ 0.58
TRAV25A0A0B4J276 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV25A0A0B4J276 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV25A0A0B4J276 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV25A0A0B4J276 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV25A0A0B4J276 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV25A0A0B4J276 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV25A0A0B4J276 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV25A0A0B4J276 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV25A0A0B4J276 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV25A0A0B4J276 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV25A0A0B4J276 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV25A0A0B4J276 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV25A0A0B4J276 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV25A0A0B4J276 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV25A0A0B4J276 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV25A0A0B4J276 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV25A0A0B4J276 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV25A0A0B4J276 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV25A0A0B4J276 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV25A0A0B4J276 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TRAV25A0A0B4J276 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAV25A0A0B4J276 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAV25A0A0B4J276 RNF126P1-201ENST00000567452 1320 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms