Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 IER3-202ENST00000376377 1350 ntBASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 FAM86EP-206ENST00000510506 987 ntBASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 AC011558.1-201ENST00000623459 338 ntBASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 AC092338.2-201ENST00000568827 1415 ntBASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 AL161938.1-201ENST00000569833 2180 ntBASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGA4Q9Y5G9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
PCDHGA4Q9Y5G9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.21■□□□□ 0.5
PCDHGA4Q9Y5G9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.21■□□□□ 0.5
PCDHGA4Q9Y5G9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 AC046158.3-201ENST00000624947 2558 ntBASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 AC010326.4-201ENST00000604665 891 ntBASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 AC093458.2-201ENST00000623150 629 ntBASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGA4Q9Y5G9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGA4Q9Y5G9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms