Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AL355877.3-201ENST00000622820 899 ntBASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 AC083906.6-201ENST00000641366 219 ntBASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
CDK11AQ9UQ88 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 RCN1P2-201ENST00000398357 915 ntBASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 RBM17P3-201ENST00000417687 1192 ntBASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 SLC25A1P1-201ENST00000528351 927 ntBASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 COX5A-204ENST00000567270 579 ntTSL 3 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 AC148477.8-201ENST00000624298 468 ntBASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 ABBA01031661.1-201ENST00000634362 1253 ntBASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC28.43■■■□□ 2.14
CDK11AQ9UQ88 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 TP73-AS1-210ENST00000637775 1455 ntBASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 AC068472.1-201ENST00000474589 881 ntBASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 RNPS1P1-201ENST00000507437 918 ntBASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 AC112777.1-201ENST00000540175 1423 ntBASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
CDK11AQ9UQ88 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 UROS-202ENST00000368778 1556 ntTSL 2 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 DANCR-204ENST00000444958 709 ntTSL 3 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
CDK11AQ9UQ88 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 KRT18P58-201ENST00000527480 1120 ntBASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 PCDHAC2-203ENST00000615316 3011 ntBASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CDK11AQ9UQ88 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDK11AQ9UQ88 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC28.39■■■□□ 2.14
CDK11AQ9UQ88 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDK11AQ9UQ88 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDK11AQ9UQ88 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC28.39■■■□□ 2.14
CDK11AQ9UQ88 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
CDK11AQ9UQ88 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC28.39■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms